Information for 12-CKGTCTAGCTGGC (Motif 8)

A G T C A C G T A C T G C A G T G T A C A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A T A C G A T G C A C G T T C G A C A T G G C T A G T A C T G C A A C T G
p-value:1e-10
log p-value:-2.408e+01
Information Content per bp:1.763
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.5 +/- 24.3bp
Average Position of motif in Background56.6 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:CKGTCTAGCTGGC---
-------NTTGGCANN
 A G T C A C G T A C T G C A G T G T A C A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.66
Offset:8
Orientation:forward strand
Alignment:CKGTCTAGCTGGC-
--------TTGGCA
 A G T C A C G T A C T G C A G T G T A C A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CKGTCTAGCTGGC--
------GGTTGGCAT
 A G T C A C G T A C T G C A G T G T A C A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CKGTCTAGCTGGC
---AACAGATGGC
 A G T C A C G T A C T G C A G T G T A C A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C
A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CKGTCTAGCTGGC-
----VCAGCTGBNN
 A G T C A C G T A C T G C A G T G T A C A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CKGTCTAGCTGGC
-VNAVCAGCTGGC
 A G T C A C G T A C T G C A G T G T A C A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C
A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CKGTCTAGCTGGC
--NAACAGCTGG-
 A G T C A C G T A C T G C A G T G T A C A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C
A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CKGTCTAGCTGGC-
----HCAGCTGDTN
 A G T C A C G T A C T G C A G T G T A C A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CKGTCTAGCTGGC--
-------CTTGGCAA
 A G T C A C G T A C T G C A G T G T A C A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CKGTCTAGCTGGC-----
--NGTAGGTTGGCATNNN
 A G T C A C G T A C T G C A G T G T A C A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T