Information for 8-ACAAAGCCAAAAT (Motif 4)

G T C A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C T G A C G T A C G T A A C G T
Reverse Opposite:
C G T A C G A T C G A T A G C T A C G T A C T G A C T G A G T C A C G T A C G T A C G T C T A G A C G T
p-value:1e-11
log p-value:-2.649e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 26.2bp
Average Position of motif in Background47.2 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF7/MA0772.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACAAAGCCAAAAT
ACGAAAGCGAAAGT
 A C G T G T C A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C T G A C G T A C G T A A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACAAAGCCAAAAT
ACAAAG-------
 G T C A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C T G A C G T A C G T A A C G T
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGCCAAAAT
VRRACAAWGG------
 A C G T A C G T A C G T G T C A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C T G A C G T A C G T A A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACAAAGCCAAAAT
-AAAAGTCAA---
 G T C A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C T G A C G T A C G T A A C G T
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ACAAAGCCAAAAT
----TGCCAA---
 G T C A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C T G A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACAAAGCCAAAAT
--CGTGCCAAG--
 G T C A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C T G A C G T A C G T A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGCCAAAAT
GGAACAAAGR------
 A C G T A C G T A C G T G T C A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C T G A C G T A C G T A A C G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGCCAAAAT
AAAACAAAGG------
 A C G T A C G T A C G T G T C A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C T G A C G T A C G T A A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACAAAGCCAAAAT
-CAAGGHCANV--
 G T C A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C T G A C G T A C G T A A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGCCAAAAT
RACAAWGG------
 A C G T G T C A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C T G A C G T A C G T A A C G T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T