Information for 7-CAACTGAGCC (Motif 13)

A G T C C G T A C G T A A G T C A C G T A C T G C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C G T A C T G
p-value:1e-5
log p-value:-1.284e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.5 +/- 23.6bp
Average Position of motif in Background63.0 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CAACTGAGCC-
---ATAATCCC
 A G T C C G T A C G T A A G T C A C G T A C T G C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAACTGAGCC
HCAGCTGDTN-
 A C G T A G T C C G T A C G T A A G T C A C G T A C T G C G T A A C T G A G T C A G T C
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAACTGAGCC
NVCAGCTGBBNN
 A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C T G C G T A A C T G A G T C A G T C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CAACTGAGCC-
CGACCAACTGCCGTG
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C T G C G T A A C T G A G T C A G T C A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CAACTGAGCC
-----CAGCC
 A G T C C G T A C G T A A G T C A C G T A C T G C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAACTGAGCC
CGCAGCTGCG--
 A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C T G C G T A A C T G A G T C A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAACTGAGCC
NNCACCTGNN--
 A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C T G C G T A A C T G A G T C A G T C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAACTGAGCC-
TGCAGCTGTCCCT
 A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C T G C G T A A C T G A G T C A G T C A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAACTGAGCC
---CGGAGC-
 A G T C C G T A C G T A A G T C A C G T A C T G C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAACTGAGCC
CCAACTGCCA-
 A C G T A G T C C G T A C G T A A G T C A C G T A C T G C G T A A C T G A G T C A G T C
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T