Information for 5-CCTGGCTGGGCAC (Motif 5)

A G T C A G T C A G C T A C T G A C T G A G T C A C G T A C T G C T A G A C T G G T A C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G G T A C A G T C A G T C C G T A A C T G A G T C G T A C C T G A A C T G A C T G
p-value:1e-11
log p-value:-2.663e+01
Information Content per bp:1.896
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 32.6bp
Average Position of motif in Background56.5 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CCTGGCTGGGCAC
--WDNCTGGGCA-
 A G T C A G T C A G C T A C T G A C T G A G T C A C G T A C T G C T A G A C T G G T A C C G T A A T G C
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CCTGGCTGGGCAC
----NGTGGGCAT
 A G T C A G T C A G C T A C T G A C T G A G T C A C G T A C T G C T A G A C T G G T A C C G T A A T G C
A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCTGGCTGGGCAC
GGGGCTYGKCTGGGA--
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C T G A C T G A G T C A C G T A C T G C T A G A C T G G T A C C G T A A T G C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCTGGCTGGGCAC
GGCCYCCTGCTGDGH--
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C T G A C T G A G T C A C G T A C T G C T A G A C T G G T A C C G T A A T G C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTGGCTGGGCAC----
-NNNNTTGGGCACNNCN
 A G T C A G T C A G C T A C T G A C T G A G T C A C G T A C T G C T A G A C T G G T A C C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTGGCTGGGCAC
CCCCCTGCTGTG---
 A C G T A C G T A G T C A G T C A G C T A C T G A C T G A G T C A C G T A C T G C T A G A C T G G T A C C G T A A T G C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCTGGCTGGGCAC
-CCTGCTGAGH--
 A G T C A G T C A G C T A C T G A C T G A G T C A C G T A C T G C T A G A C T G G T A C C G T A A T G C
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCTGGCTGGGCAC
ACATGCCCGGGCAT
 A C G T A G T C A G T C A G C T A C T G A C T G A G T C A C G T A C T G C T A G A C T G G T A C C G T A A T G C
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCTGGCTGGGCAC
TCNCCTGCTGNGNNN
 A C G T A C G T A G T C A G T C A G C T A C T G A C T G A G T C A C G T A C T G C T A G A C T G G T A C C G T A A T G C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTGGCTGGGCAC
CGTGGGTGGTCC-
 A G T C A G T C A G C T A C T G A C T G A G T C A C G T A C T G C T A G A C T G G T A C C G T A A T G C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T