Information for 10-GCGTCTCTCC (Motif 14)

A T C G G A T C A C T G C G A T A T G C A C G T A T G C C G A T T G A C T A G C
Reverse Opposite:
A T C G A C T G C G T A A T C G C G T A A T C G C G T A A G T C C T A G A T G C
p-value:1e-6
log p-value:-1.559e+01
Information Content per bp:1.780
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.15%
Number of Background Sequences with motif465.9
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets44.3 +/- 27.7bp
Average Position of motif in Background49.0 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCGTCTCTCC--
GGNGCGNCTGTTNNN
 A C G T A C G T A C G T A T C G G A T C A C T G C G A T A T G C A C G T A T G C C G A T T G A C T A G C A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCGTCTCTCC
TGCGTG-----
 A C G T A T C G G A T C A C T G C G A T A T G C A C G T A T G C C G A T T G A C T A G C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCGTCTCTCC---
-TGTCTGDCACCT
 A T C G G A T C A C T G C G A T A T G C A C G T A T G C C G A T T G A C T A G C A C G T A C G T A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCGTCTCTCC-----
ACCACTCTCGGTCAC
 A T C G G A T C A C T G C G A T A T G C A C G T A T G C C G A T T G A C T A G C A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCGTCTCTCC----
NNGCGTGTGTGCNGCN
 A C G T A C G T A T C G G A T C A C T G C G A T A T G C A C G T A T G C C G A T T G A C T A G C A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCGTCTCTCC
VBSYGTCTGG--
 A C G T A C G T A T C G G A T C A C T G C G A T A T G C A C G T A T G C C G A T T G A C T A G C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCGTCTCTCC
GGGGGTGTGTCC
 A C G T A C G T A T C G G A T C A C T G C G A T A T G C A C G T A T G C C G A T T G A C T A G C
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GCGTCTCTCC
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T A C G T A C G T A T C G G A T C A C T G C G A T A T G C A C G T A T G C C G A T T G A C T A G C
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCGTCTCTCC
GGGAATTTCC
 A T C G G A T C A C T G C G A T A T G C A C G T A T G C C G A T T G A C T A G C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCGTCTCTCC
GGGGATTTCC
 A T C G G A T C A C T G C G A T A T G C A C G T A T G C C G A T T G A C T A G C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C