Information for 7-GCCAGGGATT (Motif 11)

A C T G A G T C G T A C T C G A A C T G A C T G A T C G C G T A G C A T A C G T
Reverse Opposite:
T G C A C G T A C G A T A T G C A G T C G T A C A G C T A C T G A C T G G T A C
p-value:1e-8
log p-value:-1.847e+01
Information Content per bp:1.835
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif160.7
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets51.6 +/- 30.5bp
Average Position of motif in Background54.4 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GCCAGGGATT-
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C T C G A A C T G A C T G A T C G C G T A G C A T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCAGGGATT------
TTAGAGGGATTAACAAT
 A C G T A C T G A G T C G T A C T C G A A C T G A C T G A T C G C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCCAGGGATT---
---VRGGATTARN
 A C T G A G T C G T A C T C G A A C T G A C T G A T C G C G T A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCCAGGGATT-
---NGGGATTA
 A C T G A G T C G T A C T C G A A C T G A C T G A T C G C G T A G C A T A C G T A C G T
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GCCAGGGATT---
----GGGATTANN
 A C T G A G T C G T A C T C G A A C T G A C T G A T C G C G T A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCCAGGGATT--
--CNGTGATTTN
 A C T G A G T C G T A C T C G A A C T G A C T G A T C G C G T A G C A T A C G T A C G T A C G T
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GCCAGGGATT--
----GGGATTAA
 A C T G A G T C G T A C T C G A A C T G A C T G A T C G C G T A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

GSC/MA0648.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCCAGGGATT---
---NNGGATTAGN
 A C T G A G T C G T A C T C G A A C T G A C T G A T C G C G T A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

PH0035.1_Gsc/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCAGGGATT-------
NNAAGGGATTAACGANT
 A C T G A G T C G T A C T C G A A C T G A C T G A T C G C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCAGGGATT-------
TGTAGGGATTAATTGTC
 A C T G A G T C G T A C T C G A A C T G A C T G A T C G C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C