Information for 12-TCATGAAATAYAT (Motif 19)

A G C T A G T C G T C A A C G T C T A G C G T A C G T A G T C A A C G T C G T A A G T C C T G A A C G T
Reverse Opposite:
G T C A A G C T C T A G C G A T C G T A A C G T G C A T C G A T A G T C C G T A A C G T C T A G C T G A
p-value:1e-8
log p-value:-1.955e+01
Information Content per bp:1.761
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.4 +/- 17.6bp
Average Position of motif in Background59.0 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC10/MA0905.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCATGAAATAYAT
GTCGTAAAAT----
 A C G T A G C T A G T C G T C A A C G T C T A G C G T A C G T A G T C A A C G T C G T A A G T C C T G A A C G T
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCATGAAATAYAT
TAGGTAATAAAATTCA-
 A C G T A C G T A C G T A C G T A G C T A G T C G T C A A C G T C T A G C G T A C G T A G T C A A C G T C G T A A G T C C T G A A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCATGAAATAYAT
ACGGCCATAAAATTAAT
 A C G T A C G T A C G T A C G T A G C T A G T C G T C A A C G T C T A G C G T A C G T A G T C A A C G T C G T A A G T C C T G A A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCATGAAATAYAT
NACAGGAAAT----
 A C G T A G C T A G T C G T C A A C G T C T A G C G T A C G T A G T C A A C G T C G T A A G T C C T G A A C G T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TCATGAAATAYAT
AGAGCCATAAAATTCG-
 A C G T A C G T A C G T A C G T A G C T A G T C G T C A A C G T C T A G C G T A C G T A G T C A A C G T C G T A A G T C C T G A A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TCATGAAATAYAT
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A G C T A G T C G T C A A C G T C T A G C G T A C G T A G T C A A C G T C G T A A G T C C T G A A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCATGAAATAYAT
GGAGGTCATTAATTAT--
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T C A A C G T C T A G C G T A C G T A G T C A A C G T C G T A A G T C C T G A A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCATGAAATAYAT
GTCATAAAAN----
 A C G T A G C T A G T C G T C A A C G T C T A G C G T A C G T A G T C A A C G T C G T A A G T C C T G A A C G T
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TCATGAAATAYAT
AAAGCTCGTAAAATTT--
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T C A A C G T C T A G C G T A C G T A G T C A A C G T C G T A A G T C C T G A A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCATGAAATAYAT
GGTCGTAAAATT---
 A C G T A C G T A G C T A G T C G T C A A C G T C T A G C G T A C G T A G T C A A C G T C G T A A G T C C T G A A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T A C G T A C G T A C G T