Information for 6-AAACCACATA (Motif 5)

G C T A C G T A C T G A A G T C A G T C C G T A A G T C C G T A C G A T C G T A
Reverse Opposite:
G A C T G C T A A C G T A C T G A C G T A C T G A C T G A G C T A C G T C G A T
p-value:1e-24
log p-value:-5.666e+01
Information Content per bp:1.846
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.39%
Number of Background Sequences with motif516.8
Percentage of Background Sequences with motif1.09%
Average Position of motif in Targets47.6 +/- 25.7bp
Average Position of motif in Background49.3 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:AAACCACATA
AAACCACANN
 G C T A C G T A C T G A A G T C A G T C C G T A A G T C C G T A C G A T C G T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-AAACCACATA
NAAACCACAG-
 A C G T G C T A C G T A C T G A A G T C A G T C C G T A A G T C C G T A C G A T C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-AAACCACATA-
NWAACCACADNN
 A C G T G C T A C G T A C T G A A G T C A G T C C G T A A G T C C G T A C G A T C G T A A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:AAACCACATA-
AAACCACAGAN
 G C T A C G T A C T G A A G T C A G T C C G T A A G T C C G T A C G A T C G T A A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:AAACCACATA
AAACCACAGC
 G C T A C G T A C T G A A G T C A G T C C G T A A G T C C G T A C G A T C G T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.83
Offset:0
Orientation:forward strand
Alignment:AAACCACATA
AAACCGCAAA
 G C T A C G T A C T G A A G T C A G T C C G T A A G T C C G T A C G A T C G T A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.81
Offset:0
Orientation:forward strand
Alignment:AAACCACATA
AAACCGCAA-
 G C T A C G T A C T G A A G T C A G T C C G T A A G T C C G T A C G A T C G T A
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AAACCACATA
TCCAATCCACA--
 A C G T A C G T A C G T G C T A C G T A C T G A A G T C A G T C C G T A A G T C C G T A C G A T C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AAACCACATA
SSAATCCACANN
 A C G T A C G T G C T A C G T A C T G A A G T C A G T C C G T A A G T C C G T A C G A T C G T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Myc/MA0147.2/Jaspar

Match Rank:10
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AAACCACATA-
-AAGCACATGG
 G C T A C G T A C T G A A G T C A G T C C G T A A G T C C G T A C G A T C G T A A C G T
A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G