Information for 7-CACAGCTGTGGGCASG (Motif 14)

A T G C G C T A A T G C T G C A A C T G G T A C G C A T T A C G A C G T A T C G C T A G A T C G A G T C C G T A A T G C C A T G
Reverse Opposite:
G T A C T A C G G C A T C T A G A T G C G A T C T A G C T G C A A T G C C G T A C A T G T G A C A C G T A T C G C G A T A T C G
p-value:1e-9
log p-value:-2.087e+01
Information Content per bp:1.609
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif188.7
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets45.5 +/- 23.0bp
Average Position of motif in Background47.7 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CACAGCTGTGGGCASG
DCHCAGCAGGRGGCC--
 A C G T A T G C G C T A A T G C T G C A A C T G G T A C G C A T T A C G A C G T A T C G C T A G A T C G A G T C C G T A A T G C C A T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACAGCTGTGGGCASG
CACAGCAGGGGG----
 A T G C G C T A A T G C T G C A A C T G G T A C G C A T T A C G A C G T A T C G C T A G A T C G A G T C C G T A A T G C C A T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CACAGCTGTGGGCASG
CACAGCGGGGGGTC--
 A T G C G C T A A T G C T G C A A C T G G T A C G C A T T A C G A C G T A T C G C T A G A T C G A G T C C G T A A T G C C A T G
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CACAGCTGTGGGCASG
------NGTGGGCAT-
 A T G C G C T A A T G C T G C A A C T G G T A C G C A T T A C G A C G T A T C G C T A G A T C G A G T C C G T A A T G C C A T G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CACAGCTGTGGGCASG
NAHCAGCTGD-------
 A C G T A T G C G C T A A T G C T G C A A C T G G T A C G C A T T A C G A C G T A T C G C T A G A T C G A G T C C G T A A T G C C A T G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CACAGCTGTGGGCASG
NCGCAGCGGGGGGTC--
 A C G T A T G C G C T A A T G C T G C A A C T G G T A C G C A T T A C G A C G T A T C G C T A G A T C G A G T C C G T A A T G C C A T G
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CACAGCTGTGGGCASG
-ACAGCTGTTV-----
 A T G C G C T A A T G C T G C A A C T G G T A C G C A T T A C G A C G T A T C G C T A G A T C G A G T C C G T A A T G C C A T G
A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CACAGCTGTGGGCASG
NCNCAGCGGGGGGTC--
 A C G T A T G C G C T A A T G C T G C A A C T G G T A C G C A T T A C G A C G T A T C G C T A G A T C G A G T C C G T A A T G C C A T G
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CACAGCTGTGGGCASG
--CAGCTGTT------
 A T G C G C T A A T G C T G C A A C T G G T A C G C A T T A C G A C G T A T C G C T A G A T C G A G T C C G T A A T G C C A T G
A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CACAGCTGTGGGCASG
------GGTTGGCAT-
 A T G C G C T A A T G C T G C A A C T G G T A C G C A T T A C G A C G T A T C G C T A G A T C G A G T C C G T A A T G C C A T G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T