Information for 2-CCCTCTAGTGGCA (Motif 2)

A G T C A G T C A G T C A G C T A G T C A C G T C G T A A C T G C G A T A C T G C T A G A G T C C G T A
Reverse Opposite:
G C A T A C T G A G T C G T A C C G T A A G T C C G A T G T C A A C T G C T G A A C T G A C T G A C T G
p-value:1e-20
log p-value:-4.655e+01
Information Content per bp:1.818
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.4 +/- 24.0bp
Average Position of motif in Background47.9 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.73
Offset:-8
Orientation:forward strand
Alignment:--------CCCTCTAGTGGCA
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G C T A G T C A C G T C G T A A C T G C G A T A C T G C T A G A G T C C G T A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------CCCTCTAGTGGCA-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G C T A G T C A C G T C G T A A C T G C G A T A C T G C T A G A G T C C G T A A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTCTAGTGGCA-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G C T A G T C A C G T C G T A A C T G C G A T A C T G C T A G A G T C C G T A A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTAGTGGCA
CCCCCCCGGGGGGGT
 A C G T A C G T A G T C A G T C A G T C A G C T A G T C A C G T C G T A A C T G C G A T A C T G C T A G A G T C C G T A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCCTCTAGTGGCA-
CCCCCTTGGGCCCC
 A G T C A G T C A G T C A G C T A G T C A C G T C G T A A C T G C G A T A C T G C T A G A G T C C G T A A C G T
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTAGTGGCA
CCCCCCCGGGGGGGT
 A C G T A C G T A G T C A G T C A G T C A G C T A G T C A C G T C G T A A C T G C G A T A C T G C T A G A G T C C G T A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTAGTGGCA
CACCCCCGGGGGGG-
 A C G T A C G T A G T C A G T C A G T C A G C T A G T C A C G T C G T A A C T G C G A T A C T G C T A G A G T C C G T A
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCCTCTAGTGGCA
--RTCATGTGAC-
 A G T C A G T C A G T C A G C T A G T C A C G T C G T A A C T G C G A T A C T G C T A G A G T C C G T A
A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTAGTGGCA
TTCCCCCTAC-----
 A C G T A C G T A G T C A G T C A G T C A G C T A G T C A C G T C G T A A C T G C G A T A C T G C T A G A G T C C G T A
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCCTCTAGTGGCA
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G C T A G T C A C G T C G T A A C T G C G A T A C T G C T A G A G T C C G T A
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A