Information for 19-AAAKGYCCGA (Motif 37)

C G T A G T C A C G T A A C G T A C T G A G T C G T A C T A G C A C T G G C T A
Reverse Opposite:
C G A T A G T C A T C G C A T G C T A G A G T C T G C A C G A T A C G T A C G T
p-value:1e-3
log p-value:-7.208e+00
Information Content per bp:1.725
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.20%
Number of Background Sequences with motif655.2
Percentage of Background Sequences with motif1.44%
Average Position of motif in Targets60.5 +/- 26.6bp
Average Position of motif in Background50.9 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AAAKGYCCGA
ANGNAAAGGTCA--
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A A C G T A C T G A G T C G T A C T A G C A C T G G C T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AAAKGYCCGA
GGAGAAAGGTGCGA
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A A C G T A C T G A G T C G T A C T A G C A C T G G C T A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAKGYCCGA
CAAAGGTCAG-
 A C G T C G T A G T C A C G T A A C G T A C T G A G T C G T A C T A G C A C T G G C T A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAAKGYCCGA
GCTAATTGCT---
 A C G T A C G T A C G T C G T A G T C A C G T A A C G T A C T G A G T C G T A C T A G C A C T G G C T A
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAAKGYCCGA
NHAACBGYYV--
 A C G T A C G T C G T A G T C A C G T A A C G T A C T G A G T C G T A C T A G C A C T G G C T A
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AAAKGYCCGA--
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A A C G T A C T G A G T C G T A C T A G C A C T G G C T A A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AAAKGYCCGA
AACAAAGG-----
 A C G T A C G T A C G T C G T A G T C A C G T A A C G T A C T G A G T C G T A C T A G C A C T G G C T A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AAAKGYCCGA
RACAAWGG-----
 A C G T A C G T A C G T C G T A G T C A C G T A A C G T A C T G A G T C G T A C T A G C A C T G G C T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAAKGYCCGA
CCAACTGCCA--
 A C G T A C G T C G T A G T C A C G T A A C G T A C T G A G T C G T A C T A G C A C T G G C T A
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAAKGYCCGA
YAACBGCC---
 A C G T C G T A G T C A C G T A A C G T A C T G A G T C G T A C T A G C A C T G G C T A
A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T A C G T