Information for 16-CTYGATCACG (Motif 32)

A G T C G C A T A G T C A C T G G T C A A C G T G A T C G T C A T A G C A C T G
Reverse Opposite:
G T A C A C T G A C G T C A T G C G T A A C G T G T A C T C A G C G T A A C T G
p-value:1e-5
log p-value:-1.292e+01
Information Content per bp:1.696
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif4.12%
Number of Background Sequences with motif664.7
Percentage of Background Sequences with motif1.46%
Average Position of motif in Targets50.5 +/- 26.2bp
Average Position of motif in Background49.8 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0016.1_Cux1_1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTYGATCACG---
ACCGGTTGATCACCTGA
 A C G T A C G T A C G T A C G T A G T C G C A T A G T C A C T G G T C A A C G T G A T C G T C A T A G C A C T G A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CTYGATCACG
NNAATTCTCGNTNAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T A G T C A C T G G T C A A C G T G A T C G T C A T A G C A C T G
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTYGATCACG
NTATYGATCH--
 A C G T A C G T A G T C G C A T A G T C A C T G G T C A A C G T G A T C G T C A T A G C A C T G
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTYGATCACG
NTATCGATTA--
 A C G T A C G T A G T C G C A T A G T C A C T G G T C A A C G T G A T C G T C A T A G C A C T G
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTYGATCACG-
---GATGACGT
 A G T C G C A T A G T C A C T G G T C A A C G T G A T C G T C A T A G C A C T G A C G T
A C G T A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

GATA5/MA0766.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTYGATCACG
--AGATAAGA
 A G T C G C A T A G T C A C T G G T C A A C G T G A T C G T C A T A G C A C T G
A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

CUX2/MA0755.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTYGATCACG
TTATCGATTA--
 A C G T A C G T A G T C G C A T A G T C A C T G G T C A A C G T G A T C G T C A T A G C A C T G
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTYGATCACG---
---GGTCACGTGG
 A G T C G C A T A G T C A C T G G T C A A C G T G A T C G T C A T A G C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTYGATCACG
ATTGATTYND
 A G T C G C A T A G T C A C T G G T C A A C G T G A T C G T C A T A G C A C T G
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTYGATCACG
-NGGATTAN-
 A G T C G C A T A G T C A C T G G T C A A C G T G A T C G T C A T A G C A C T G
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T