Information for 12-CCTTTGMTCY (Motif 28)

T A G C G A T C G C A T A C G T C G A T T A C G T G C A G A C T G A T C G A C T
Reverse Opposite:
C T G A C T A G C T G A A C G T A T G C G C T A G T C A C G T A C T A G A T C G
p-value:1e-7
log p-value:-1.831e+01
Information Content per bp:1.558
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif4.12%
Number of Background Sequences with motif502.7
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets45.5 +/- 26.7bp
Average Position of motif in Background49.3 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0040.1_Lef1_1/Jaspar

Match Rank:1
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----CCTTTGMTCY---
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T T A G C G A T C G C A T A C G T C G A T T A C G T G C A G A C T G A T C G A C T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----CCTTTGMTCY---
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A C G T T A G C G A T C G C A T A C G T C G A T T A C G T G C A G A C T G A T C G A C T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Tcf7/MA0769.1/Jaspar

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CCTTTGMTCY--
CCTTTGATCTTT
 T A G C G A T C G C A T A C G T C G A T T A C G T G C A G A C T G A T C G A C T A C G T A C G T
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTGMTCY
TNCCTTTGATGT
 A C G T A C G T T A G C G A T C G C A T A C G T C G A T T A C G T G C A G A C T G A T C G A C T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGMTCY--
AACCCTTTGATCTTT
 A C G T A C G T A C G T T A G C G A T C G C A T A C G T C G A T T A C G T G C A G A C T G A T C G A C T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTGMTCY--
TNCCTTTGATCTTN
 A C G T A C G T T A G C G A T C G C A T A C G T C G A T T A C G T G C A G A C T G A T C G A C T A C G T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTGMTCY---
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A C G T T A G C G A T C G C A T A C G T C G A T T A C G T G C A G A C T G A T C G A C T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTGMTCY---
NNTTCCTTTGATCTNNA
 A C G T A C G T A C G T A C G T T A G C G A T C G C A T A C G T C G A T T A C G T G C A G A C T G A T C G A C T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CCTTTGMTCY
CCTTTGATGT
 T A G C G A T C G C A T A C G T C G A T T A C G T G C A G A C T G A T C G A C T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGMTCY--
TGACCTTTGCCCTAN
 A C G T A C G T A C G T T A G C G A T C G C A T A C G T C G A T T A C G T G C A G A C T G A T C G A C T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C