Information for 11-GCTMATCAGATTAMAA (Motif 14)

C T A G A G T C C G A T T G A C C G T A C G A T A G T C C G T A C T A G C G T A A G C T C G A T C G T A G T C A C T G A C G T A
Reverse Opposite:
C G A T G A C T C A G T G C A T C G T A C T G A A C G T A G T C A C G T C T A G C G T A C G A T A C T G C G T A C T A G A G T C
p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.735
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets38.0 +/- 19.3bp
Average Position of motif in Background52.3 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GCTMATCAGATTAMAA
--TAATCHGATTAC--
 C T A G A G T C C G A T T G A C C G T A C G A T A G T C C G T A C T A G C G T A A G C T C G A T C G T A G T C A C T G A C G T A
A C G T A C G T G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C A C G T A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GCTMATCAGATTAMAA
-YTAATYNRATTA---
 C T A G A G T C C G A T T G A C C G T A C G A T A G T C C G T A C T A G C G T A A G C T C G A T C G T A G T C A C T G A C G T A
A C G T G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCTMATCAGATTAMAA
--TAATTAAATTA---
 C T A G A G T C C G A T T G A C C G T A C G A T A G T C C G T A C T A G C G T A A G C T C G A T C G T A G T C A C T G A C G T A
A C G T A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCTMATCAGATTAMAA
-NTAATBNAATTA---
 C T A G A G T C C G A T T G A C C G T A C G A T A G T C C G T A C T A G C G T A A G C T C G A T C G T A G T C A C T G A C G T A
A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCTMATCAGATTAMAA
--TAATTAAATTA---
 C T A G A G T C C G A T T G A C C G T A C G A T A G T C C G T A C T A G C G T A A G C T C G A T C G T A G T C A C T G A C G T A
A C G T A C G T G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A A C G T A C G T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCTMATCAGATTAMAA
--TAATTAAATTA---
 C T A G A G T C C G A T T G A C C G T A C G A T A G T C C G T A C T A G C G T A A G C T C G A T C G T A G T C A C T G A C G T A
A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T A C G T A C G T

PH0097.1_Lhx6_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCTMATCAGATTAMAA
NNNCGCTAATTAGNNGA---
 A C G T A C G T A C G T A C G T C T A G A G T C C G A T T G A C C G T A C G A T A G T C C G T A C T A G C G T A A G C T C G A T C G T A G T C A C T G A C G T A
T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A A C G T A C G T A C G T

PH0131.1_Pax4/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCTMATCAGATTAMAA
NNGNGCTAATTAGNTNA---
 A C G T A C G T A C G T A C G T C T A G A G T C C G A T T G A C C G T A C G A T A G T C C G T A C T A G C G T A A G C T C G A T C G T A G T C A C T G A C G T A
C A T G G A C T A T C G T C A G C T A G A G T C C A G T C G T A C T G A A G C T G A C T G T C A C T A G G C A T A G C T A T G C C G T A A C G T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTMATCAGATTAMAA
-NTGATTAAATTAN--
 C T A G A G T C C G A T T G A C C G T A C G A T A G T C C G T A C T A G C G T A A G C T C G A T C G T A G T C A C T G A C G T A
A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G A C G T A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCTMATCAGATTAMAA
CACCGCTAATTAGNNGN---
 A C G T A C G T A C G T A C G T C T A G A G T C C G A T T G A C C G T A C G A T A G T C C G T A C T A G C G T A A G C T C G A T C G T A G T C A C T G A C G T A
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T A C G T A C G T A C G T