Information for 10-GTGGGCCAAAGGAGTA (Motif 13)

A C T G A C G T A C T G A C T G A C T G A G T C G T A C C G T A C T G A C T G A A C T G A C T G G T C A A C T G A C G T C G T A
Reverse Opposite:
A C G T G T C A G T A C C A G T G T A C A G T C A G C T A G C T A C G T A C T G T C A G A G T C G T A C A G T C G T C A G T A C
p-value:1e-11
log p-value:-2.600e+01
Information Content per bp:1.783
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 25.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGGGCCAAAGGAGTA
-TGGGGCAAAGGTCA-
 A C T G A C G T A C T G A C T G A C T G A G T C G T A C C G T A C T G A C T G A A C T G A C T G G T C A A C T G A C G T C G T A
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTGGGCCAAAGGAGTA
GTAGGGCAAAGGTCA-
 A C T G A C G T A C T G A C T G A C T G A G T C G T A C C G T A C T G A C T G A A C T G A C T G G T C A A C T G A C G T C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTGGGCCAAAGGAGTA
-CGTGCCAAG------
 A C T G A C G T A C T G A C T G A C T G A G T C G T A C C G T A C T G A C T G A A C T G A C T G G T C A A C T G A C G T C G T A
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTGGGCCAAAGGAGTA
GGGGCCCAAGGGGG--
 A C T G A C G T A C T G A C T G A C T G A G T C G T A C C G T A C T G A C T G A A C T G A C T G G T C A A C T G A C G T C G T A
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTGGGCCAAAGGAGTA
---TGCCAA-------
 A C T G A C G T A C T G A C T G A C T G A G T C G T A C C G T A C T G A C T G A A C T G A C T G G T C A A C T G A C G T C G T A
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTGGGCCAAAGGAGTA-
-GGGGTCAAAGTCCAAT
 A C T G A C G T A C T G A C T G A C T G A G T C G T A C C G T A C T G A C T G A A C T G A C T G G T C A A C T G A C G T C G T A A C G T
A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTGGGCCAAAGGAGTA
-GGTGCCAAGT-----
 A C T G A C G T A C T G A C T G A C T G A G T C G T A C C G T A C T G A C T G A A C T G A C T G G T C A A C T G A C G T C G T A
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTGGGCCAAAGGAGTA
-TAGGGCAAAGGTCA-
 A C T G A C G T A C T G A C T G A C T G A G T C G T A C C G T A C T G A C T G A A C T G A C T G G T C A A C T G A C G T C G T A
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTGGGCCAAAGGAGTA
--AGGTCAAGGTCA--
 A C T G A C G T A C T G A C T G A C T G A G T C G T A C C G T A C T G A C T G A A C T G A C T G G T C A A C T G A C G T C G T A
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GTGGGCCAAAGGAGTA
--GGAACAAAGR----
 A C T G A C G T A C T G A C T G A C T G A G T C G T A C C G T A C T G A C T G A A C T G A C T G G T C A A C T G A C G T C G T A
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T