Information for 9-AGGTTAATSA (Motif 14)

T G C A A T C G A C T G A G C T A C G T C G T A C T G A A C G T A T G C C G T A
Reverse Opposite:
G C A T A T C G G T C A A G C T A C G T C G T A C T G A G T A C T A G C A C G T
p-value:1e-9
log p-value:-2.261e+01
Information Content per bp:1.779
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif29.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets64.9 +/- 25.5bp
Average Position of motif in Background46.2 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:AGGTTAATSA
--GKTAATGR
 T G C A A T C G A C T G A G C T A C G T C G T A C T G A A C G T A T G C C G T A
A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

NKX6-1/MA0674.1/Jaspar

Match Rank:2
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:AGGTTAATSA-
---TTAATTAN
 T G C A A T C G A C T G A G C T A C G T C G T A C T G A A C G T A T G C C G T A A C G T
A C G T A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

EVX2/MA0888.1/Jaspar

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:AGGTTAATSA--
--NNTAATTANN
 T G C A A T C G A C T G A G C T A C G T C G T A C T G A A C G T A T G C C G T A A C G T A C G T
A C G T A C G T T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C

EVX1/MA0887.1/Jaspar

Match Rank:4
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:AGGTTAATSA--
--GNTAATTANN
 T G C A A T C G A C T G A G C T A C G T C G T A C T G A A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C

HOXB2/MA0902.1/Jaspar

Match Rank:5
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:AGGTTAATSA--
--NNTAATTANN
 T G C A A T C G A C T G A G C T A C G T C G T A C T G A A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T

HOXB3/MA0903.1/Jaspar

Match Rank:6
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AGGTTAATSA--
--NNTAATTANN
 T G C A A T C G A C T G A G C T A C G T C G T A C T G A A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

HOXA2/MA0900.1/Jaspar

Match Rank:7
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AGGTTAATSA--
--GNTAATTANN
 T G C A A T C G A C T G A G C T A C G T C G T A C T G A A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A T C G A T C G C G A T C T G A G T C A A G C T A C G T C T G A A T C G A T C G

PH0174.1_Vax1/Jaspar

Match Rank:8
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGGTTAATSA------
ACGTTAATTAACCCAG
 T G C A A T C G A C T G A G C T A C G T C G T A C T G A A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T C A G C G A T G A C T G T C A G C T A C G A T C A G T C T G A T C G A A G T C G A T C G A T C C G T A C T A G

PH0151.1_Pou6f1_1/Jaspar

Match Rank:9
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AGGTTAATSA------
GACGATAATGAGCTTGC
 A C G T T G C A A T C G A C T G A G C T A C G T C G T A C T G A A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

EMX1/MA0612.1/Jaspar

Match Rank:10
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AGGTTAATSA--
--CCTAATTACC
 T G C A A T C G A C T G A G C T A C G T C G T A C T G A A C G T A T G C C G T A A C G T A C G T
A C G T A C G T T G A C A G T C G A C T T C G A C G T A C G A T C A G T C T G A T A G C A G T C