Information for 11-CGCCCAGCAGCCA (Motif 13)

G T A C C T A G A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C T G A G T C A G T C C T G A
Reverse Opposite:
A G C T A C T G A C T G A G T C A C G T A C T G A T G C A C G T A C T G A C T G A C T G A G T C A C T G
p-value:1e-10
log p-value:-2.445e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.8 +/- 22.4bp
Average Position of motif in Background46.4 +/- 39.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGCCCAGCAGCCA
ATTTCCCAGVAKSCY
 A C G T A C G T G T A C C T A G A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C T G A G T C A G T C C T G A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGCCCAGCAGCCA-
CCACACAGCAGGAGA
 A C G T G T A C C T A G A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C T G A G T C A G T C C T G A A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGCCCAGCAGCCA-
CCACACAGCAGGAGA
 A C G T G T A C C T A G A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C T G A G T C A G T C C T G A A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGCCCAGCAGCCA-
--CACAGCAGGGGG
 G T A C C T A G A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C T G A G T C A G T C C T G A A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGCCCAGCAGCCA---
CGACCAACTGCCATGC
 G T A C C T A G A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C T G A G T C A G T C C T G A A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGCCCAGCAGCCA---
-DCHCAGCAGGRGGCC
 G T A C C T A G A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C T G A G T C A G T C C T G A A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGCCCAGCAGCCA
TGTTKCCTAGCAACM-
 A C G T A C G T A C G T G T A C C T A G A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C T G A G T C A G T C C T G A
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGCCCAGCAGCCA
---CCAACTGCCA
 G T A C C T A G A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C T G A G T C A G T C C T G A
A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CGCCCAGCAGCCA-
------BCAGACWA
 G T A C C T A G A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C T G A G T C A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGCCCAGCAGCCA-
GAGCACAGCAGGACA
 A C G T G T A C C T A G A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C T G A G T C A G T C C T G A A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A