Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-206 | -4.745e+02 | 0.0000 | 244.0 | 32.66% | 1053.0 | 2.20% | motif file (matrix) |
svg |
2 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-79 | -1.833e+02 | 0.0000 | 200.0 | 26.77% | 2589.0 | 5.40% | motif file (matrix) |
svg |
3 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-78 | -1.813e+02 | 0.0000 | 183.0 | 24.50% | 2151.7 | 4.49% | motif file (matrix) |
svg |
4 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-72 | -1.675e+02 | 0.0000 | 274.0 | 36.68% | 5390.0 | 11.24% | motif file (matrix) |
svg |
5 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-58 | -1.339e+02 | 0.0000 | 66.0 | 8.84% | 236.9 | 0.49% | motif file (matrix) |
svg |
6 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-39 | -9.027e+01 | 0.0000 | 62.0 | 8.30% | 410.1 | 0.86% | motif file (matrix) |
svg |
7 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-34 | -7.927e+01 | 0.0000 | 111.0 | 14.86% | 1767.9 | 3.69% | motif file (matrix) |
svg |
8 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-34 | -7.849e+01 | 0.0000 | 94.0 | 12.58% | 1280.8 | 2.67% | motif file (matrix) |
svg |
9 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-33 | -7.678e+01 | 0.0000 | 88.0 | 11.78% | 1143.2 | 2.38% | motif file (matrix) |
svg |
10 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-32 | -7.597e+01 | 0.0000 | 178.0 | 23.83% | 4284.1 | 8.94% | motif file (matrix) |
svg |
11 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-31 | -7.147e+01 | 0.0000 | 113.0 | 15.13% | 2001.6 | 4.18% | motif file (matrix) |
svg |
12 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-28 | -6.479e+01 | 0.0000 | 137.0 | 18.34% | 3040.3 | 6.34% | motif file (matrix) |
svg |
13 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-27 | -6.258e+01 | 0.0000 | 94.0 | 12.58% | 1586.1 | 3.31% | motif file (matrix) |
svg |
14 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-27 | -6.235e+01 | 0.0000 | 309.0 | 41.37% | 11191.6 | 23.35% | motif file (matrix) |
svg |
15 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-14 | -3.332e+01 | 0.0000 | 93.0 | 12.45% | 2429.7 | 5.07% | motif file (matrix) |
svg |
16 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-13 | -3.178e+01 | 0.0000 | 78.0 | 10.44% | 1888.2 | 3.94% | motif file (matrix) |
svg |
17 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-13 | -3.147e+01 | 0.0000 | 84.0 | 11.24% | 2138.5 | 4.46% | motif file (matrix) |
svg |
18 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-13 | -3.053e+01 | 0.0000 | 40.0 | 5.35% | 602.2 | 1.26% | motif file (matrix) |
svg |
19 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-12 | -2.898e+01 | 0.0000 | 80.0 | 10.71% | 2077.2 | 4.33% | motif file (matrix) |
svg |
20 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-12 | -2.816e+01 | 0.0000 | 22.0 | 2.95% | 185.3 | 0.39% | motif file (matrix) |
svg |
21 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-11 | -2.736e+01 | 0.0000 | 71.0 | 9.50% | 1780.7 | 3.71% | motif file (matrix) |
svg |
22 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-10 | -2.491e+01 | 0.0000 | 14.0 | 1.87% | 71.8 | 0.15% | motif file (matrix) |
svg |
23 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-10 | -2.409e+01 | 0.0000 | 58.0 | 7.76% | 1394.2 | 2.91% | motif file (matrix) |
svg |
24 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-10 | -2.329e+01 | 0.0000 | 36.0 | 4.82% | 634.6 | 1.32% | motif file (matrix) |
svg |
25 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-9 | -2.273e+01 | 0.0000 | 48.0 | 6.43% | 1064.3 | 2.22% | motif file (matrix) |
svg |
26 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-9 | -2.129e+01 | 0.0000 | 15.0 | 2.01% | 112.2 | 0.23% | motif file (matrix) |
svg |
27 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-8 | -2.036e+01 | 0.0000 | 53.0 | 7.10% | 1341.2 | 2.80% | motif file (matrix) |
svg |
28 |
| GFY(?)/Promoter/Homer | 1e-8 | -2.036e+01 | 0.0000 | 16.0 | 2.14% | 140.7 | 0.29% | motif file (matrix) |
svg |
29 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-7 | -1.823e+01 | 0.0000 | 21.0 | 2.81% | 289.2 | 0.60% | motif file (matrix) |
svg |
30 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-7 | -1.675e+01 | 0.0000 | 44.0 | 5.89% | 1128.5 | 2.35% | motif file (matrix) |
svg |
31 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-7 | -1.627e+01 | 0.0000 | 43.0 | 5.76% | 1108.3 | 2.31% | motif file (matrix) |
svg |
32 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-6 | -1.511e+01 | 0.0000 | 58.0 | 7.76% | 1801.3 | 3.76% | motif file (matrix) |
svg |
33 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-6 | -1.475e+01 | 0.0000 | 42.0 | 5.62% | 1132.1 | 2.36% | motif file (matrix) |
svg |
34 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-5 | -1.310e+01 | 0.0000 | 46.0 | 6.16% | 1382.9 | 2.88% | motif file (matrix) |
svg |
35 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-5 | -1.301e+01 | 0.0000 | 28.0 | 3.75% | 649.0 | 1.35% | motif file (matrix) |
svg |
36 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-5 | -1.211e+01 | 0.0001 | 45.0 | 6.02% | 1392.2 | 2.90% | motif file (matrix) |
svg |
37 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.144e+01 | 0.0001 | 21.0 | 2.81% | 444.3 | 0.93% | motif file (matrix) |
svg |
38 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-4 | -1.111e+01 | 0.0001 | 15.0 | 2.01% | 252.2 | 0.53% | motif file (matrix) |
svg |
39 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-4 | -1.101e+01 | 0.0002 | 33.0 | 4.42% | 930.1 | 1.94% | motif file (matrix) |
svg |
40 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-4 | -1.034e+01 | 0.0003 | 14.0 | 1.87% | 238.6 | 0.50% | motif file (matrix) |
svg |
41 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-4 | -1.013e+01 | 0.0004 | 46.0 | 6.16% | 1558.2 | 3.25% | motif file (matrix) |
svg |
42 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -8.706e+00 | 0.0014 | 45.0 | 6.02% | 1611.6 | 3.36% | motif file (matrix) |
svg |
43 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-3 | -8.200e+00 | 0.0023 | 11.0 | 1.47% | 192.3 | 0.40% | motif file (matrix) |
svg |
44 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-3 | -7.986e+00 | 0.0028 | 11.0 | 1.47% | 197.6 | 0.41% | motif file (matrix) |
svg |
45 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-3 | -7.830e+00 | 0.0032 | 100.0 | 13.39% | 4573.2 | 9.54% | motif file (matrix) |
svg |
46 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.607e+00 | 0.0039 | 57.0 | 7.63% | 2302.4 | 4.80% | motif file (matrix) |
svg |
47 |
| Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer | 1e-3 | -7.564e+00 | 0.0040 | 38.0 | 5.09% | 1360.7 | 2.84% | motif file (matrix) |
svg |
48 |
| ETS(ETS)/Promoter/Homer | 1e-3 | -7.394e+00 | 0.0047 | 23.0 | 3.08% | 683.3 | 1.43% | motif file (matrix) |
svg |
49 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.205e+00 | 0.0055 | 33.0 | 4.42% | 1148.4 | 2.40% | motif file (matrix) |
svg |
50 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-3 | -7.118e+00 | 0.0059 | 42.0 | 5.62% | 1590.8 | 3.32% | motif file (matrix) |
svg |
51 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-3 | -7.077e+00 | 0.0060 | 41.0 | 5.49% | 1544.6 | 3.22% | motif file (matrix) |
svg |
52 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-3 | -7.028e+00 | 0.0062 | 25.0 | 3.35% | 791.5 | 1.65% | motif file (matrix) |
svg |
53 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.860e+00 | 0.0072 | 50.0 | 6.69% | 2016.4 | 4.21% | motif file (matrix) |
svg |
54 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-2 | -6.805e+00 | 0.0075 | 11.0 | 1.47% | 228.7 | 0.48% | motif file (matrix) |
svg |
55 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -6.619e+00 | 0.0088 | 58.0 | 7.76% | 2456.1 | 5.12% | motif file (matrix) |
svg |
56 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -6.525e+00 | 0.0095 | 15.0 | 2.01% | 389.6 | 0.81% | motif file (matrix) |
svg |
57 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-2 | -6.357e+00 | 0.0111 | 40.0 | 5.35% | 1556.3 | 3.25% | motif file (matrix) |
svg |
58 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -6.234e+00 | 0.0123 | 40.0 | 5.35% | 1567.4 | 3.27% | motif file (matrix) |
svg |
59 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -6.188e+00 | 0.0127 | 90.0 | 12.05% | 4252.3 | 8.87% | motif file (matrix) |
svg |
60 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-2 | -6.042e+00 | 0.0144 | 39.0 | 5.22% | 1535.0 | 3.20% | motif file (matrix) |
svg |
61 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -5.980e+00 | 0.0151 | 83.0 | 11.11% | 3893.6 | 8.12% | motif file (matrix) |
svg |
62 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.968e+00 | 0.0151 | 30.0 | 4.02% | 1095.5 | 2.29% | motif file (matrix) |
svg |
63 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-2 | -5.956e+00 | 0.0151 | 51.0 | 6.83% | 2161.3 | 4.51% | motif file (matrix) |
svg |
64 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -5.923e+00 | 0.0152 | 36.0 | 4.82% | 1394.1 | 2.91% | motif file (matrix) |
svg |
65 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -5.917e+00 | 0.0152 | 15.0 | 2.01% | 415.8 | 0.87% | motif file (matrix) |
svg |
66 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-2 | -5.771e+00 | 0.0172 | 43.0 | 5.76% | 1764.2 | 3.68% | motif file (matrix) |
svg |
67 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -5.718e+00 | 0.0179 | 25.0 | 3.35% | 874.7 | 1.82% | motif file (matrix) |
svg |
68 |
| FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer | 1e-2 | -5.643e+00 | 0.0190 | 24.0 | 3.21% | 832.5 | 1.74% | motif file (matrix) |
svg |
69 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-2 | -5.641e+00 | 0.0190 | 6.0 | 0.80% | 92.0 | 0.19% | motif file (matrix) |
svg |
70 |
| E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer | 1e-2 | -5.578e+00 | 0.0197 | 9.0 | 1.20% | 193.1 | 0.40% | motif file (matrix) |
svg |
71 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-2 | -5.500e+00 | 0.0210 | 38.0 | 5.09% | 1534.3 | 3.20% | motif file (matrix) |
svg |
72 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.191e+00 | 0.0281 | 67.0 | 8.97% | 3121.5 | 6.51% | motif file (matrix) |
svg |
73 |
| ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.157e+00 | 0.0287 | 4.0 | 0.54% | 45.4 | 0.09% | motif file (matrix) |
svg |
74 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -5.116e+00 | 0.0295 | 50.0 | 6.69% | 2205.6 | 4.60% | motif file (matrix) |
svg |
75 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -4.974e+00 | 0.0336 | 43.0 | 5.76% | 1849.3 | 3.86% | motif file (matrix) |
svg |
76 |
| Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer | 1e-2 | -4.928e+00 | 0.0347 | 6.0 | 0.80% | 107.4 | 0.22% | motif file (matrix) |
svg |
77 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-2 | -4.905e+00 | 0.0350 | 17.0 | 2.28% | 555.1 | 1.16% | motif file (matrix) |
svg |