Information for 10-GCAGAGAVTTCTT (Motif 12)

A C T G G T A C C G T A A C T G C G T A A C T G G T C A T C G A A C G T A C G T A G T C A C G T A C G T
Reverse Opposite:
G T C A C G T A A C T G C G T A C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C T G A G T C
p-value:1e-11
log p-value:-2.562e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.6 +/- 10.5bp
Average Position of motif in Background62.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCAGAGAVTTCTT
GCAGTGATTT---
 A C T G G T A C C G T A A C T G C G T A A C T G G T C A T C G A A C G T A C G T A G T C A C G T A C G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCAGAGAVTTCTT
TGCTGTGATTT---
 A C G T A C T G G T A C C G T A A C T G C G T A A C T G G T C A T C G A A C G T A C G T A G T C A C G T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCAGAGAVTTCTT
AGGGAAGTCATTTCT-
 A C G T A C G T A C G T A C T G G T A C C G T A A C T G C G T A A C T G G T C A T C G A A C G T A C G T A G T C A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCAGAGAVTTCTT
TTGACCGAGAATTCC-
 A C G T A C G T A C G T A C T G G T A C C G T A A C T G C G T A A C T G G T C A T C G A A C G T A C G T A G T C A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCAGAGAVTTCTT
GVACAGNMTGTYCTB
 A C G T A C G T A C T G G T A C C G T A A C T G C G T A A C T G G T C A T C G A A C G T A C G T A G T C A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCAGAGAVTTCTT
GNNACCGAGAATNNN-
 A C G T A C G T A C G T A C T G G T A C C G T A A C T G C G T A A C T G G T C A T C G A A C G T A C G T A G T C A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCAGAGAVTTCTT---
-TAGAANVTTCTAGAA
 A C T G G T A C C G T A A C T G C G T A A C T G G T C A T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCAGAGAVTTCTT---
GACAGAGATATCAGTGT
 A C G T A C T G G T A C C G T A A C T G C G T A A C T G G T C A T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCAGAGAVTTCTT-----
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C T G G T A C C G T A A C T G C G T A A C T G G T C A T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------GCAGAGAVTTCTT
NNNANTGCAGTGCNNTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A A C T G C G T A A C T G G T C A T C G A A C G T A C G T A G T C A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T