Information for 4-CTTTAYYTTTAYSWTK (Motif 5)

A G T C A C G T A C G T A G C T C G T A A G C T A G T C A C G T A C G T A C G T C G T A G A C T A T G C C G A T A C G T A C G T
Reverse Opposite:
T G C A C G T A C G T A A T C G C T G A A C G T C G T A C G T A C G T A C T A G C T G A A C G T C T G A C G T A C G T A C T A G
p-value:1e-12
log p-value:-2.837e+01
Information Content per bp:1.850
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 23.4bp
Average Position of motif in Background40.9 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1/MA0050.2/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CTTTAYYTTTAYSWTK
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G C T C G T A A G C T A G T C A C G T A C G T A C G T C G T A G A C T A T G C C G A T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTTTAYYTTTAYSWTK
--TGACCTTTNCNT--
 A G T C A C G T A C G T A G C T C G T A A G C T A G T C A C G T A C G T A C G T C G T A G A C T A T G C C G A T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTTAYYTTTAYSWTK
TCACTTTCACTTTCN----
 A C G T A C G T A C G T A G T C A C G T A C G T A G C T C G T A A G C T A G T C A C G T A C G T A C G T C G T A G A C T A T G C C G A T A C G T A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTTTAYYTTTAYSWTK
-TCTATTTTTAGA---
 A G T C A C G T A C G T A G C T C G T A A G C T A G T C A C G T A C G T A C G T C G T A G A C T A T G C C G A T A C G T A C G T
A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTTTAYYTTTAYSWTK
TCTTTANTAATANN---
 A C G T A G T C A C G T A C G T A G C T C G T A A G C T A G T C A C G T A C G T A C G T C G T A G A C T A T G C C G A T A C G T A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTTTAYYTTTAYSWTK
-GCTATTTTTAGC---
 A G T C A C G T A C G T A G C T C G T A A G C T A G T C A C G T A C G T A C G T C G T A G A C T A T G C C G A T A C G T A C G T
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTTTAYYTTTAYSWTK
TTCTATTTTTAGNNN-
 A G T C A C G T A C G T A G C T C G T A A G C T A G T C A C G T A C G T A C G T C G T A G A C T A T G C C G A T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTTTAYYTTTAYSWTK
-TTAATGTTTAACC--
 A G T C A C G T A C G T A G C T C G T A A G C T A G T C A C G T A C G T A C G T C G T A G A C T A T G C C G A T A C G T A C G T
A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTTTAYYTTTAYSWTK-
---NTTGTTTACGTTNN
 A G T C A C G T A C G T A G C T C G T A A G C T A G T C A C G T A C G T A C G T C G T A G A C T A T G C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTTTAYYTTTAYSWTK
ACTTTCACTTTC-----
 A C G T A G T C A C G T A C G T A G C T C G T A A G C T A G T C A C G T A C G T A C G T C G T A G A C T A T G C C G A T A C G T A C G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T A C G T A C G T