Information for 4-TCTGTTGCCA (Motif 5)

C G A T A T G C G A C T A C T G A G C T A C G T A T C G T G A C A G T C C G T A
Reverse Opposite:
C G A T A C T G A C T G T A G C G T C A T C G A A G T C C T G A A T C G C G T A
p-value:1e-13
log p-value:-3.133e+01
Information Content per bp:1.842
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif122.1
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets48.9 +/- 20.1bp
Average Position of motif in Background45.0 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TCTGTTGCCA---
-CTGTTGCTAGGS
 C G A T A T G C G A C T A C T G A G C T A C G T A T C G T G A C A G T C C G T A A C G T A C G T A C G T
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TCTGTTGCCA--
----TTGCCAAG
 C G A T A T G C G A C T A C T G A G C T A C G T A T C G T G A C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TCTGTTGCCA--
---CGTGCCAAG
 C G A T A T G C G A C T A C T G A G C T A C G T A T C G T G A C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCTGTTGCCA---
---GGTGCCAAGT
 C G A T A T G C G A C T A C T G A G C T A C G T A T C G T G A C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCTGTTGCCA-----
NNCGTTGCTATGGNN
 C G A T A T G C G A C T A C T G A G C T A C G T A T C G T G A C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCTGTTGCCA--
GGTGYTGACAGS
 C G A T A T G C G A C T A C T G A G C T A C G T A T C G T G A C A G T C C G T A A C G T A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TCTGTTGCCA-
-----TGCCAA
 C G A T A T G C G A C T A C T G A G C T A C G T A T C G T G A C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TCTGTTGCCA-------
---GTTGCCATGGNAAC
 C G A T A T G C G A C T A C T G A G C T A C G T A T C G T G A C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCTGTTGCCA
-CTGTTTAC-
 C G A T A T G C G A C T A C T G A G C T A C G T A T C G T G A C A G T C C G T A
A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCTGTTGCCA-----
NCCGTTGCTANGNGN
 C G A T A T G C G A C T A C T G A G C T A C G T A T C G T G A C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G