Information for 24-TRATYKCTKTWACATT (Motif 45)

A C G T T C A G C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T C G A T C G T A A T G C C G T A A G C T A C G T
Reverse Opposite:
C G T A C T G A A C G T A T C G A C G T C G T A C G T A G T A C C G T A A C T G G T A C C T A G C G T A A C G T A G C T C G T A
p-value:1e-6
log p-value:-1.425e+01
Information Content per bp:1.857
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.7 +/- 5.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0135.1_Hoxa3_2/Jaspar

Match Rank:1
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TRATYKCTKTWACATT
CCTTAATNGNTTTT-----
 A C G T A C G T A C G T A C G T T C A G C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T C G A T C G T A A T G C C G T A A G C T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T A C G T A C G T A C G T A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:2
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TRATYKCTKTWACATT
ANNCATTAATTGCTNGN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T C G A T C G T A A T G C C G T A A G C T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:3
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TRATYKCTKTWACATT
ANNCATTAATTGCTNGN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T C G A T C G T A A T G C C G T A A G C T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TRATYKCTKTWACATT
NNNTTAATTGGTTTTT----
 A C G T A C G T A C G T A C G T A C G T T C A G C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T C G A T C G T A A T G C C G T A A G C T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T A C G T A C G T A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TRATYKCTKTWACATT
CTAATCGNT--------
 A C G T A C G T T C A G C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T C G A T C G T A A T G C C G T A A G C T A C G T
G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TRATYKCTKTWACATT
-----NTTGATACATT
 A C G T T C A G C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T C G A T C G T A A T G C C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TRATYKCTKTWACATT
-----GCTGTTACCCT
 A C G T T C A G C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T C G A T C G T A A T G C C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

Hmx2/MA0897.1/Jaspar

Match Rank:8
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------TRATYKCTKTWACATT
ATTCNTTAATTGCTTGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T C G A T C G T A A T G C C G T A A G C T A C G T
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T

PH0042.1_Hmx2/Jaspar

Match Rank:9
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------TRATYKCTKTWACATT
ATTCNTTAATTGCTTGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T C G A T C G T A A T G C C G T A A G C T A C G T
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TRATYKCTKTWACATT--
---TCACTTTCACTTTCN
 A C G T T C A G C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T C G A T C G T A A T G C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T