Information for 15-ATGAATGGTG (Motif 42)

C T G A C G A T A T C G C T G A C G T A A C G T C T A G A C T G G A C T A T C G
Reverse Opposite:
A T G C C T G A T G A C A G T C G T C A C G A T A G C T A T G C C G T A A G C T
p-value:1e-7
log p-value:-1.659e+01
Information Content per bp:1.702
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif232.7
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets57.3 +/- 27.1bp
Average Position of motif in Background50.2 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------ATGAATGGTG
NNTNTCATGAATGT--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T A T C G C T G A C G T A A C G T C T A G A C T G G A C T A T C G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----ATGAATGGTG--
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T C T G A C G A T A T C G C T G A C G T A A C G T C T A G A C T G G A C T A T C G A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATGAATGGTG
ATGAATATTC
 C T G A C G A T A T C G C T G A C G T A A C G T C T A G A C T G G A C T A T C G
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------ATGAATGGTG
ACTATGAATGAATGAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T A T C G C T G A C G T A A C G T C T A G A C T G G A C T A T C G
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATGAATGGTG
GAACAATGG--
 A C G T C T G A C G A T A T C G C T G A C G T A A C G T C T A G A C T G G A C T A T C G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGAATGGTG---
GGAGAAAGGTGCGA
 A C G T C T G A C G A T A T C G C T G A C G T A A C G T C T A G A C T G G A C T A T C G A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATGAATGGTG
VRAACAATGG--
 A C G T A C G T C T G A C G A T A T C G C T G A C G T A A C G T C T A G A C T G G A C T A T C G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATGAATGGTG
RAACAATGGN-
 A C G T C T G A C G A T A T C G C T G A C G T A A C G T C T A G A C T G G A C T A T C G
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ATGAATGGTG
HNRAATCAAT----
 A C G T A C G T A C G T A C G T C T G A C G A T A T C G C T G A C G T A A C G T C T A G A C T G G A C T A T C G
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATGAATGGTG
TTGATTGN--
 C T G A C G A T A T C G C T G A C G T A A C G T C T A G A C T G G A C T A T C G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T