Information for 2-SCCTGWGRGWMATTCY (Motif 4)

A T C G A T G C A G T C A C G T A C T G C G T A A T C G C T G A A C T G C G A T G T A C C G T A A C G T A G C T A G T C A G C T
Reverse Opposite:
C T G A A C T G C T G A C G T A C G A T A C T G C G T A A G T C A G C T A T G C C G A T A G T C C G T A A C T G A T C G A T G C
p-value:1e-13
log p-value:-3.150e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.3 +/- 23.8bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:SCCTGWGRGWMATTCY
SCCTSAGGSCAW----
 A T C G A T G C A G T C A C G T A C T G C G T A A T C G C T G A A C T G C G A T G T A C C G T A A C G T A G C T A G T C A G C T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:SCCTGWGRGWMATTCY
GCCTCAGGGCAT----
 A T C G A T G C A G T C A C G T A C T G C G T A A T C G C T G A A C T G C G A T G T A C C G T A A C G T A G C T A G T C A G C T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---SCCTGWGRGWMATTCY
ATTGCCTGAGGCGAA----
 A C G T A C G T A C G T A T C G A T G C A G T C A C G T A C T G C G T A A T C G C T G A A C T G C G A T G T A C C G T A A C G T A G C T A G T C A G C T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:4
Score:0.56
Offset:8
Orientation:forward strand
Alignment:SCCTGWGRGWMATTCY--
--------CACATTCCAT
 A T C G A T G C A G T C A C G T A C T G C G T A A T C G C T G A A C T G C G A T G T A C C G T A A C G T A G C T A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---SCCTGWGRGWMATTCY
ATTCCCTGAGGGGAA----
 A C G T A C G T A C G T A T C G A T G C A G T C A C G T A C T G C G T A A T C G C T G A A C T G C G A T G T A C C G T A A C G T A G C T A G T C A G C T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---SCCTGWGRGWMATTCY
ATTGCCTGAGGCAAT----
 A C G T A C G T A C G T A T C G A T G C A G T C A C G T A C T G C G T A A T C G C T G A A C T G C G A T G T A C C G T A A C G T A G C T A G T C A G C T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:SCCTGWGRGWMATTCY-
-----NGGGGATTTCCC
 A T C G A T G C A G T C A C G T A C T G C G T A A T C G C T G A A C T G C G A T G T A C C G T A A C G T A G C T A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:SCCTGWGRGWMATTCY
-GCTGTG---------
 A T C G A T G C A G T C A C G T A C T G C G T A A T C G C T G A A C T G C G A T G T A C C G T A A C G T A G C T A G T C A G C T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:SCCTGWGRGWMATTCY
------GGGGATTTCC
 A T C G A T G C A G T C A C G T A C T G C G T A A T C G C T G A A C T G C G A T G T A C C G T A A C G T A G C T A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:SCCTGWGRGWMATTCY---
---------GCATTCCAGN
 A T C G A T G C A G T C A C G T A C T G C G T A A T C G C T G A A C T G C G A T G T A C C G T A A C G T A G C T A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G