Information for 17-ACATGCTGTAACA (Motif 38)

C T G A G T A C C G T A A C G T A C T G A G T C A C G T A C T G A C G T C G T A G T C A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A G T C G T C A A C G T A C T G A G C T
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.2 +/- 18.3bp
Average Position of motif in Background45.1 +/- 1.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TP63/MA0525.2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACATGCTGTAACA----
AACATGTTGGGACATGTC
 A C G T C T G A G T A C C G T A A C G T A C T G A G T C A C G T A C T G A C G T C G T A G T C A A G T C C G T A A C G T A C G T A C G T A C G T
C T G A C T G A A G T C C T G A G C A T A C T G G A C T G A C T T C A G A C T G C T A G C T G A A G T C C G T A G A C T A C T G G A C T G T A C

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACATGCTGTAACA---
AAGACGCTGTAAAGCGA
 A C G T C T G A G T A C C G T A A C G T A C T G A G T C A C G T A C T G A C G T C G T A G T C A A G T C C G T A A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACATGCTGTAACA---
AAGACGCTGTAAAGCGA
 A C G T C T G A G T A C C G T A A C G T A C T G A G T C A C G T A C T G A C G T C G T A G T C A A G T C C G T A A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACATGCTGTAACA---
AGGACGCTGTAAAGGGA
 A C G T C T G A G T A C C G T A A C G T A C T G A G T C A C G T A C T G A C G T C G T A G T C A A G T C C G T A A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACATGCTGTAACA
--ATGATGCAAT-
 C T G A G T A C C G T A A C G T A C T G A G T C A C G T A C T G A C G T C G T A G T C A A G T C C G T A
A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ACATGCTGTAACA--
----AATGTATCAAT
 C T G A G T A C C G T A A C G T A C T G A G T C A C G T A C T G A C G T C G T A G T C A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACATGCTGTAACA
NNTCCTGCTGTGNNN
 A C G T A C G T C T G A G T A C C G T A A C G T A C T G A G T C A C G T A C T G A C G T C G T A G T C A A G T C C G T A
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACATGCTGTAACA
--MTGATGCAAT-
 C T G A G T A C C G T A A C G T A C T G A G T C A C G T A C T G A C G T C G T A G T C A A G T C C G T A
A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACATGCTGTAACA
-CCTGCTGAGH--
 C T G A G T A C C G T A A C G T A C T G A G T C A C G T A C T G A C G T C G T A G T C A A G T C C G T A
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ACATGCTGTAACA
NGGAACATNATGTACCC
 A C G T A C G T A C G T A C G T C T G A G T A C C G T A A C G T A C T G A G T C A C G T A C T G A C G T C G T A G T C A A G T C C G T A
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C