Information for 1-AHTGTGYAAACAD (Motif 2)

T C G A G C A T C G A T C T A G C G A T C A T G A G T C G T C A T G C A C G T A A T G C G C T A C A G T
Reverse Opposite:
G T C A C G A T A T C G C G A T A C G T A C G T T C A G G T A C G C T A G A T C G C T A C G T A A G C T
p-value:1e-13
log p-value:-3.220e+01
Information Content per bp:1.612
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.99%
Number of Background Sequences with motif309.9
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets55.9 +/- 24.0bp
Average Position of motif in Background50.5 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---AHTGTGYAAACAD-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T T C G A G C A T C G A T C T A G C G A T C A T G A G T C G T C A T G C A C G T A A T G C G C T A C A G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXA1/MA0148.3/Jaspar

Match Rank:2
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:AHTGTGYAAACAD---
-CAAAGTAAACANNNN
 T C G A G C A T C G A T C T A G C G A T C A T G A G T C G T C A T G C A C G T A A T G C G C T A C A G T A C G T A C G T A C G T
A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:3
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:AHTGTGYAAACAD-
--TATGTAAACANG
 T C G A G C A T C G A T C T A G C G A T C A T G A G T C G T C A T G C A C G T A A T G C G C T A C A G T A C G T
A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:4
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:AHTGTGYAAACAD--
NCWRWGTAAACANSV
 T C G A G C A T C G A T C T A G C G A T C A T G A G T C G T C A T G C A C G T A A T G C G C T A C A G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:AHTGTGYAAACAD
NCTAAGTAAACA-
 T C G A G C A T C G A T C T A G C G A T C A T G A G T C G T C A T G C A C G T A A T G C G C T A C A G T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.82
Offset:2
Orientation:forward strand
Alignment:AHTGTGYAAACAD
--AAAGTAAACA-
 T C G A G C A T C G A T C T A G C G A T C A T G A G T C G T C A T G C A C G T A A T G C G C T A C A G T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.81
Offset:2
Orientation:forward strand
Alignment:AHTGTGYAAACAD
--AAAGTAAACA-
 T C G A G C A T C G A T C T A G C G A T C A T G A G T C G T C A T G C A C G T A A T G C G C T A C A G T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:8
Score:0.79
Offset:4
Orientation:forward strand
Alignment:AHTGTGYAAACAD
----DGTAAACA-
 T C G A G C A T C G A T C T A G C G A T C A T G A G T C G T C A T G C A C G T A A T G C G C T A C A G T
A C G T A C G T A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.79
Offset:1
Orientation:forward strand
Alignment:AHTGTGYAAACAD
-WWATRTAAACAN
 T C G A G C A T C G A T C T A G C G A T C A T G A G T C G T C A T G C A C G T A A T G C G C T A C A G T
A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:10
Score:0.79
Offset:2
Orientation:forward strand
Alignment:AHTGTGYAAACAD-
--WWTRTAAACAVG
 T C G A G C A T C G A T C T A G C G A T C A T G A G T C G T C A T G C A C G T A A T G C G C T A C A G T A C G T
A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G