Information for 7-GWTTACTDAG (Motif 7)

C T A G C G A T A C G T C G A T G C T A T G A C C G A T C A T G T C G A C A T G
Reverse Opposite:
G T A C A G C T G T A C G C T A A C T G C G A T C G T A C G T A G C T A G A T C
p-value:1e-15
log p-value:-3.545e+01
Information Content per bp:1.610
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif5.65%
Number of Background Sequences with motif544.3
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets52.1 +/- 26.8bp
Average Position of motif in Background47.2 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX6-1/MA0674.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GWTTACTDAG
--TTAATTAN
 C T A G C G A T A C G T C G A T G C T A T G A C C G A T C A T G T C G A C A T G
A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

mix-a/MA0621.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GWTTACTDAG-
AATTAATTAGT
 C T A G C G A T A C G T C G A T G C T A T G A C C G A T C A T G T C G A C A T G A C G T
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GWTTACTDAG-
TGTTTACTTAGG
 A C G T C T A G C G A T A C G T C G A T G C T A T G A C C G A T C A T G T C G A C A T G A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GWTTACTDAG
TGTTTACTTT-
 A C G T C T A G C G A T A C G T C G A T G C T A T G A C C G A T C A T G T C G A C A T G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GWTTACTDAG
TGTTTACTTT-
 A C G T C T A G C G A T A C G T C G A T G C T A T G A C C G A T C A T G T C G A C A T G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GWTTACTDAG---
AGTTATTAATGAGGTC
 A C G T A C G T A C G T C T A G C G A T A C G T C G A T G C T A T G A C C G A T C A T G T C G A C A T G A C G T A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

Arid3b/MA0601.1/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GWTTACTDAG
ATATTAATTAA
 A C G T C T A G C G A T A C G T C G A T G C T A T G A C C G A T C A T G T C G A C A T G
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----GWTTACTDAG
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T A C G T C T A G C G A T A C G T C G A T G C T A T G A C C G A T C A T G T C G A C A T G
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

PH0120.1_Nkx6-3/Jaspar

Match Rank:9
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GWTTACTDAG----
GAAAATTAATTACTTTG
 A C G T A C G T A C G T C T A G C G A T A C G T C G A T G C T A T G A C C G A T C A T G T C G A C A T G A C G T A C G T A C G T A C G T
C T A G T G C A G C A T C G T A G C T A C G A T G A C T C G T A C G T A C G A T A C G T C T G A T G A C A G C T A C G T A G C T A C T G

PH0147.1_Pou3f2/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GWTTACTDAG----
GATAATTAATTAGTTTG
 A C G T A C G T A C G T C T A G C G A T A C G T C G A T G C T A T G A C C G A T C A T G T C G A C A T G A C G T A C G T A C G T A C G T
T A C G C G A T C G A T C G T A G C T A G A C T A G C T G C T A C G T A C G A T A C G T G C T A C T A G A C G T C A G T G A C T C T A G