Information for 19-GHTTATCWKGTCA (Motif 34)

C A T G G C T A C G A T C G A T C T G A C A G T T G A C C G T A C A G T C A T G A G C T A G T C C G T A
Reverse Opposite:
A C G T C T A G C T G A G T A C G T C A C G A T A C T G G T C A A G C T C G T A C G T A C G A T G T A C
p-value:1e-7
log p-value:-1.669e+01
Information Content per bp:1.718
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif22.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets61.4 +/- 30.3bp
Average Position of motif in Background60.8 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GHTTATCWKGTCA-
TNTTATCTTATCTT
 C A T G G C T A C G A T C G A T C T G A C A G T T G A C C G T A C A G T C A T G A G C T A G T C C G T A A C G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

JUN/MA0488.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GHTTATCWKGTCA-
-AAGATGATGTCAT
 C A T G G C T A C G A T C G A T C T G A C A G T T G A C C G T A C A G T C A T G A G C T A G T C C G T A A C G T
A C G T C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GHTTATCWKGTCA
-----TRAGGTCA
 C A T G G C T A C G A T C G A T C T G A C A G T T G A C C G T A C A G T C A T G A G C T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

JUND(var.2)/MA0492.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GHTTATCWKGTCA--
AAAGATGATGTCATC
 C A T G G C T A C G A T C G A T C T G A C A G T T G A C C G T A C A G T C A T G A G C T A G T C C G T A A C G T A C G T
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:GHTTATCWKGTCA-
-------NTGTCAN
 C A T G G C T A C G A T C G A T C T G A C A G T T G A C C G T A C A G T C A T G A G C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.63
Offset:7
Orientation:forward strand
Alignment:GHTTATCWKGTCA
-------AGGTCA
 C A T G G C T A C G A T C G A T C T G A C A G T T G A C C G T A C A G T C A T G A G C T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GHTTATCWKGTCA
---ATCAAGGTCA
 C A T G G C T A C G A T C G A T C T G A C A G T T G A C C G T A C A G T C A T G A G C T A G T C C G T A
A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GHTTATCWKGTCA-
------CCTGTCAA
 C A T G G C T A C G A T C G A T C T G A C A G T T G A C C G T A C A G T C A T G A G C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GHTTATCWKGTCA---
----ATGACGTCATCN
 C A T G G C T A C G A T C G A T C T G A C A G T T G A C C G T A C A G T C A T G A G C T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GHTTATCWKGTCA---
----ATGACGTCAYYN
 C A T G G C T A C G A T C G A T C T G A C A G T T G A C C G T A C A G T C A T G A G C T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G