Information for 14-GATGSTGATA (Motif 30)

C A T G T C G A C G A T A C T G T A C G C G A T C T A G G T C A A C G T G T C A
Reverse Opposite:
A C G T C G T A A C G T A G T C C G T A A T G C A G T C C G T A A G C T G T A C
p-value:1e-8
log p-value:-2.060e+01
Information Content per bp:1.786
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif190.7
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets45.2 +/- 21.6bp
Average Position of motif in Background50.2 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GATGSTGATA----
AGATGCTRCTRCCHT
 A C G T C A T G T C G A C G A T A C T G T A C G C G A T C T A G G T C A A C G T G T C A A C G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GATGSTGATA-
-AAGGTGTKAA
 C A T G T C G A C G A T A C T G T A C G C G A T C T A G G T C A A C G T G T C A A C G T
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GATGSTGATA--
--AGGTGTTAAT
 C A T G T C G A C G A T A C T G T A C G C G A T C T A G G T C A A C G T G T C A A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

PB0022.1_Gata5_1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GATGSTGATA-------
TAAACTGATAAGAAGAT
 C A T G T C G A C G A T A C T G T A C G C G A T C T A G G T C A A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GATGSTGATA--
GGTGYTGACAGS
 C A T G T C G A C G A T A C T G T A C G C G A T C T A G G T C A A C G T G T C A A C G T A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

GATA5/MA0766.1/Jaspar

Match Rank:6
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GATGSTGATA---
-----AGATAAGA
 C A T G T C G A C G A T A C T G T A C G C G A T C T A G G T C A A C G T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GATGSTGATA
--AGGTGTCA
 C A T G T C G A C G A T A C T G T A C G C G A T C T A G G T C A A C G T G T C A
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

PH0166.1_Six6_2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GATGSTGATA-------
AATNTTGATACCCTATN
 C A T G T C G A C G A T A C T G T A C G C G A T C T A G G T C A A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GATGSTGATA---
---NBWGATAAGR
 C A T G T C G A C G A T A C T G T A C G C G A T C T A G G T C A A C G T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GATGSTGATA--
TATGCWAATBAV
 C A T G T C G A C G A T A C T G T A C G C G A T C T A G G T C A A C G T G T C A A C G T A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G