Information for 11-GGAAACTTTGAAG (Motif 24)

A C T G C T A G C G T A C G T A C G T A A G T C C G A T A C G T A C G T A C T G C G T A C G T A C T A G
Reverse Opposite:
A G T C C G A T A C G T A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A G T C A G T C
p-value:1e-9
log p-value:-2.243e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.6 +/- 34.3bp
Average Position of motif in Background30.8 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GGAAACTTTGAAG-
----CCTTTGATGT
 A C T G C T A G C G T A C G T A C G T A A G T C C G A T A C G T A C G T A C T G C G T A C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGAAACTTTGAAG---
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A G T C C G A T A C G T A C G T A C T G C G T A C G T A C T A G A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GGAAACTTTGAAG-
----CCTTTGAWGT
 A C T G C T A G C G T A C G T A C G T A A G T C C G A T A C G T A C G T A C T G C G T A C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGAAACTTTGAAG
AATGGAAAAT------
 A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A G T C C G A T A C G T A C G T A C T G C G T A C G T A C T A G
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGAAACTTTGAAG
NNTGGAAANN------
 A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A G T C C G A T A C G T A C G T A C T G C G T A C G T A C T A G
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGAAACTTTGAAG---
--TNCCTTTGATCTTN
 A C T G C T A G C G T A C G T A C G T A A G T C C G A T A C G T A C G T A C T G C G T A C G T A C T A G A C G T A C G T A C G T
A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GGAAACTTTGAAG---
------TTTGAAACCG
 A C T G C T A G C G T A C G T A C G T A A G T C C G A T A C G T A C G T A C T G C G T A C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGAAACTTTGAAG
AATGGAAAAT------
 A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A G T C C G A T A C G T A C G T A C T G C G T A C G T A C T A G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGAAACTTTGAAG----
NNTTCCTTTGATCTANA
 A C T G C T A G C G T A C G T A C G T A A G T C C G A T A C G T A C G T A C T G C G T A C G T A C T A G A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGAAACTTTGAAG-
--TNCCTTTGATGT
 A C T G C T A G C G T A C G T A C G T A A G T C C G A T A C G T A C G T A C T G C G T A C G T A C T A G A C G T
A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T