Information for 13-TCTTTGAAACTCCTGC (Motif 14)

A C G T A G T C A C G T A G C T C G A T A C T G C G T A C G T A C G T A G T A C C G A T A T G C A G T C A C G T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A C T A G A T C G C G T A C A T G C G A T A C G T A C G T A G T C C G T A C T G A C G T A C T A G C G T A
p-value:1e-12
log p-value:-2.775e+01
Information Content per bp:1.819
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 21.7bp
Average Position of motif in Background39.1 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCTTTGAAACTCCTGC
--TTTGAAACCG----
 A C G T A G T C A C G T A G C T C G A T A C T G C G T A C G T A C G T A G T A C C G A T A T G C A G T C A C G T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCTTTGAAACTCCTGC
NTTTCTNAGAAA-------
 A C G T A C G T A C G T A C G T A G T C A C G T A G C T C G A T A C T G C G T A C G T A C G T A G T A C C G A T A T G C A G T C A C G T A T C G A G T C
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCTTTGAAACTCCTGC
TTCTTGGAAAN------
 A C G T A C G T A G T C A C G T A G C T C G A T A C T G C G T A C G T A C G T A G T A C C G A T A T G C A G T C A C G T A T C G A G T C
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCTTTGAAACTCCTGC
-ATTTGAATT------
 A C G T A G T C A C G T A G C T C G A T A C T G C G T A C G T A C G T A G T A C C G A T A T G C A G T C A C G T A T C G A G T C
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCTTTGAAACTCCTGC
CCGTATTATAAACAA----
 A C G T A C G T A C G T A C G T A G T C A C G T A G C T C G A T A C T G C G T A C G T A C G T A G T A C C G A T A T G C A G T C A C G T A T C G A G T C
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCTTTGAAACTCCTGC
CCTTTGATGT------
 A C G T A G T C A C G T A G C T C G A T A C T G C G T A C G T A C G T A G T A C C G A T A T G C A G T C A C G T A T C G A G T C
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TCTTTGAAACTCCTGC
NNNATTCCTCGAAAGN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G C T C G A T A C T G C G T A C G T A C G T A G T A C C G A T A T G C A G T C A C G T A T C G A G T C
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A A C G T A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TCTTTGAAACTCCTGC
NNNTTTCCTGGAAA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G C T C G A T A C T G C G T A C G T A C G T A G T A C C G A T A T G C A G T C A C G T A T C G A G T C
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCTTTGAAACTCCTGC
TTCTAGAABNTTCTA-
 A C G T A G T C A C G T A G C T C G A T A C T G C G T A C G T A C G T A G T A C C G A T A T G C A G T C A C G T A T C G A G T C
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A A C G T

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCTTTGAAACTCCTGC
CTTCTGGGAAA-------
 A C G T A C G T A C G T A G T C A C G T A G C T C G A T A C T G C G T A C G T A C G T A G T A C C G A T A T G C A G T C A C G T A T C G A G T C
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T