Information for 1-TRGTTAATNATTAACY (Motif 1)

A C G T C T A G C T A G G A C T C G A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A T C
Reverse Opposite:
C T A G C T A G A G C T G C A T C T G A G T C A G C A T A T C G C G T A C A G T G A C T G C T A C T G A G A T C G A T C T G C A
p-value:1e-254
log p-value:-5.859e+02
Information Content per bp:1.611
Number of Target Sequences with motif187.0
Percentage of Target Sequences with motif26.41%
Number of Background Sequences with motif242.2
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets49.5 +/- 22.5bp
Average Position of motif in Background47.5 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1B/MA0153.2/Jaspar

Match Rank:1
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:TRGTTAATNATTAACY
--GTTAATNATTAAC-
 A C G T C T A G C T A G G A C T C G A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A T C
A C G T A C G T C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.95
Offset:1
Orientation:forward strand
Alignment:TRGTTAATNATTAACY
-AGTTAATGATTAACT
 A C G T C T A G C T A G G A C T C G A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A T C
A C G T C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.93
Offset:3
Orientation:reverse strand
Alignment:TRGTTAATNATTAACY
---TTAATNATTAAC-
 A C G T C T A G C T A G G A C T C G A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A T C
A C G T A C G T A C G T A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.93
Offset:3
Orientation:reverse strand
Alignment:TRGTTAATNATTAACY
---TTAATGTTTAACC
 A C G T C T A G C T A G G A C T C G A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A T C
A C G T A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

PH0051.1_Hoxa4/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TRGTTAATNATTAACY--
-GATTATTAATTAACTTG
 A C G T C T A G C T A G G A C T C G A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A T C A C G T A C G T
A C G T C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G

POU4F3/MA0791.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TRGTTAATNATTAACY
CTCATTAATTATGCAT-
 A C G T A C G T C T A G C T A G G A C T C G A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A T C
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TRGTTAATNATTAACY
-CATTAATTATTCAT-
 A C G T C T A G C T A G G A C T C G A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A T C
A C G T G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T A C G T

PH0059.1_Hoxb4/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TRGTTAATNATTAACY--
-GNTNATTAATTAACNNG
 A C G T C T A G C T A G G A C T C G A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A T C A C G T A C G T
A C G T C T A G C A T G A C G T C G T A T C G A G A C T G A C T G T C A C G T A C G A T A C G T C T G A C T G A A G T C C A T G A G T C A T C G

PH0018.1_Dbx1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TRGTTAATNATTAACY-
TNATTATTAATTAATTA
 A C G T C T A G C T A G G A C T C G A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A T C A C G T
G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A

PH0070.1_Hoxc5/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TRGTTAATNATTAACY--
-NNTNATTAATTAATTCG
 A C G T C T A G C T A G G A C T C G A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A T C A C G T A C G T
A C G T C G T A C T A G A C G T C G T A C T G A A G C T G A C T G T C A C G T A G C A T C A G T C T G A T C G A A G C T C A G T A T G C A T C G