Information for 9-TGGCTTTTTCTTG (Motif 9)

A C G T A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T A G T C A C G T A C G T A C T G
Reverse Opposite:
G T A C C G T A C G T A C T A G C G T A C G T A C G T A C G T A C G T A A T C G A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.505e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 24.3bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGGCTTTTTCTTG----
NNNNTTTTTTTTTNAAC
 A C G T A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGGCTTTTTCTTG---
--NNTTTTTCTTATNT
 A C G T A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TGGCTTTTTCTTG-----
----TTTTTTTTCNNGTN
 A C G T A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGGCTTTTTCTTG-
----TTTTTATTGG
 A C G T A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGGCTTTTTCTTG-
----NTTTTATTGG
 A C G T A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGGCTTTTTCTTG-
--KCTATTTTTRGH
 A C G T A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGGCTTTTTCTTG-
--GCTATTTTTAGC
 A C G T A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGGCTTTTTCTTG----
-NNAATTTTATTGGNTN
 A C G T A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGGCTTTTTCTTG-
--GCTATTTTTGGM
 A C G T A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

PB0116.1_Elf3_2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGGCTTTTTCTTG---
GNATTTTTTTTTTGANC
 A C G T A C G T A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C