Information for 5-KSRGGTGGCKCCASST (Motif 8)

C A T G T A G C C T G A A C T G A T C G A C G T A C T G A C T G A T G C A C T G A G T C A G T C C G T A A T G C T A G C A C G T
Reverse Opposite:
G T C A A T C G A T C G A C G T A C T G A C T G G T A C A T C G A G T C A G T C C G T A A T G C A G T C A G C T A T C G G T A C
p-value:1e-11
log p-value:-2.570e+01
Information Content per bp:1.841
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.8 +/- 34.6bp
Average Position of motif in Background33.2 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:KSRGGTGGCKCCASST-
NNNNTTGGCGCCGANNN
 C A T G T A G C C T G A A C T G A T C G A C G T A C T G A C T G A T G C A C T G A G T C A G T C C G T A A T G C T A G C A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:KSRGGTGGCKCCASST-
NNNNTTGGCGCCGANNN
 C A T G T A G C C T G A A C T G A T C G A C G T A C T G A C T G A T G C A C T G A G T C A G T C C G T A A T G C T A G C A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--KSRGGTGGCKCCASST
GCGGAGGTGTCGCCTC--
 A C G T A C G T C A T G T A G C C T G A A C T G A T C G A C G T A C T G A C T G A T G C A C T G A G T C A G T C C G T A A T G C T A G C A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:KSRGGTGGCKCCASST
---TTTGGCGCCAAA-
 C A T G T A G C C T G A A C T G A T C G A C G T A C T G A C T G A T G C A C T G A G T C A G T C C G T A A T G C T A G C A C G T
A C G T A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-KSRGGTGGCKCCASST
NNCAGGTGNN-------
 A C G T C A T G T A G C C T G A A C T G A T C G A C G T A C T G A C T G A T G C A C T G A G T C A G T C C G T A A T G C T A G C A C G T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--KSRGGTGGCKCCASST
SDGCAGGTGCNS------
 A C G T A C G T C A T G T A G C C T G A A C T G A T C G A C G T A C T G A C T G A T G C A C T G A G T C A G T C C G T A A T G C T A G C A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:KSRGGTGGCKCCASST--
------GGCTCYAKCAYC
 C A T G T A G C C T G A A C T G A T C G A C G T A C T G A C T G A T G C A C T G A G T C A G T C C G T A A T G C T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----KSRGGTGGCKCCASST
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T C A T G T A G C C T G A A C T G A T C G A C G T A C T G A C T G A T G C A C T G A G T C A G T C C G T A A T G C T A G C A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:KSRGGTGGCKCCASST
GGGGGCGGGGCC----
 C A T G T A G C C T G A A C T G A T C G A C G T A C T G A C T G A T G C A C T G A G T C A G T C C G T A A T G C T A G C A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-KSRGGTGGCKCCASST
AACAGGTGT--------
 A C G T C A T G T A G C C T G A A C T G A T C G A C G T A C T G A C T G A T G C A C T G A G T C A G T C C G T A A T G C T A G C A C G T
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T