Information for 8-GAGACACATGTCT (Motif 7)

C T A G C G T A A T C G C G T A G T A C C G T A A G T C C T G A A C G T C A T G A C G T A T G C A C G T
Reverse Opposite:
C G T A A T C G C G T A G T A C C G T A A G C T C T A G A C G T C A T G A C G T A T G C C G A T A G T C
p-value:1e-11
log p-value:-2.570e+01
Information Content per bp:1.791
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.5 +/- 20.0bp
Average Position of motif in Background58.9 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2/MA0669.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GAGACACATGTCT
--GACATATGTT-
 C T A G C G T A A T C G C G T A G T A C C G T A A G T C C T G A A C G T C A T G A C G T A T G C A C G T
A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAGACACATGTCT
--AACACGTGTT-
 C T A G C G T A A T C G C G T A G T A C C G T A A G T C C T G A A C G T C A T G A C G T A T G C A C G T
A C G T A C G T C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAGACACATGTCT
--GACACGTGCC-
 C T A G C G T A A T C G C G T A G T A C C G T A A G T C C T G A A C G T C A T G A C G T A T G C A C G T
A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T

Hes2/MA0616.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGACACATGTCT
TAACGACACGTGC--
 A C G T A C G T C T A G C G T A A T C G C G T A G T A C C G T A A G T C C T G A A C G T C A T G A C G T A T G C A C G T
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAGACACATGTCT
-TGACACCTGTCA
 C T A G C G T A A T C G C G T A G T A C C G T A A G T C C T G A A C G T C A T G A C G T A T G C A C G T
A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

Twist2/MA0633.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGACACATGTCT
--ACCATATGTT-
 C T A G C G T A A T C G C G T A G T A C C G T A A G T C C T G A A C G T C A T G A C G T A T G C A C G T
A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGACACATGTCT
-TGACAGCTGTCA
 C T A G C G T A A T C G C G T A G T A C C G T A A G T C C T G A A C G T C A T G A C G T A T G C A C G T
A C G T G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A

PKNOX1/MA0782.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGACACATGTCT
-TGACACCTGTCA
 C T A G C G T A A T C G C G T A G T A C C G T A A G T C C T G A A C G T C A T G A C G T A T G C A C G T
A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A

HEY1/MA0823.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGACACATGTCT
--GGCACGTGTC-
 C T A G C G T A A T C G C G T A G T A C C G T A A G T C C T G A A C G T C A T G A C G T A T G C A C G T
A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGACACATGTCT
--GCCACGTGT--
 C T A G C G T A A T C G C G T A G T A C C G T A A G T C C T G A A C G T C A T G A C G T A T G C A C G T
A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T