Information for 7-TGGCCCTGGGGCTGAG (Motif 17)

A C G T A C T G A C T G A G T C A G T C G T A C C G A T A C T G A C T G A C T G A C T G A G T C A C G T A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C T G A G T C G T A C A G T C A G T C C G T A C A T G A C T G A C T G A G T C A G T C C G T A
p-value:1e-6
log p-value:-1.395e+01
Information Content per bp:1.926
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 21.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TGGCCCTGGGGCTGAG
GGAGCTGTCCATGGTGCTGA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C G T A C C G A T A C T G A C T G A C T G A C T G A G T C A C G T A C T G C G T A C T A G
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A A C G T

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCCCTGGGGCTGAG
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C G T A C C G A T A C T G A C T G A C T G A C T G A G T C A C G T A C T G C G T A C T A G
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

TFAP2B/MA0811.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGGCCCTGGGGCTGAG
-TGCCCTNGGGCA---
 A C G T A C T G A C T G A G T C A G T C G T A C C G A T A C T G A C T G A C T G A C T G A G T C A C G T A C T G C G T A C T A G
A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGGCCCTGGGGCTGAG
-TGCCCTNGGGCA---
 A C G T A C T G A C T G A G T C A G T C G T A C C G A T A C T G A C T G A C T G A C T G A G T C A C G T A C T G C G T A C T A G
A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGGCCCTGGGGCTGAG
-TGCCCNGGGGCA---
 A C G T A C T G A C T G A G T C A G T C G T A C C G A T A C T G A C T G A C T G A C T G A G T C A C G T A C T G C G T A C T A G
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGCCCTGGGGCTGAG
NTGCCCTTGGGCGN--
 A C G T A C T G A C T G A G T C A G T C G T A C C G A T A C T G A C T G A C T G A C T G A G T C A C G T A C T G C G T A C T A G
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGCCCTGGGGCTGAG
NTGCCCTAGGGCAA--
 A C G T A C T G A C T G A G T C A G T C G T A C C G A T A C T G A C T G A C T G A C T G A G T C A C G T A C T G C G T A C T A G
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGCCCTGGGGCTGAG
ATGCCCTGAGGC----
 A C G T A C T G A C T G A G T C A G T C G T A C C G A T A C T G A C T G A C T G A C T G A G T C A C G T A C T G C G T A C T A G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGCCCTGGGGCTGAG
TGCCCTGAGGGCA---
 A C G T A C T G A C T G A G T C A G T C G T A C C G A T A C T G A C T G A C T G A C T G A G T C A C G T A C T G C G T A C T A G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGCCCTGGGGCTGAG
TGCCCTGAGGGCA---
 A C G T A C T G A C T G A G T C A G T C G T A C C G A T A C T G A C T G A C T G A C T G A G T C A C G T A C T G C G T A C T A G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T