Information for 13-ATGGTTGGTACCT (Motif 16)

C G T A A C G T A C T G A C T G A C G T C G A T A C T G A T C G C G A T C G T A G T A C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G A C G T C G T A A T G C A G T C C G T A C G T A A G T C A G T C C G T A C G A T
p-value:1e-6
log p-value:-1.502e+01
Information Content per bp:1.917
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.3 +/- 11.0bp
Average Position of motif in Background81.1 +/- 10.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATGGTTGGTACCT
--GGTTGGCAT--
 C G T A A C G T A C T G A C T G A C G T C G A T A C T G A T C G C G A T C G T A G T A C A G T C C G A T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATGGTTGGTACCT---
GCTGGGGGGTACCCCTT
 A C G T C G T A A C G T A C T G A C T G A C G T C G A T A C T G A T C G C G A T C G T A G T A C A G T C C G A T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATGGTTGGTACCT-
NGTAGGTTGGCATNNN
 A C G T A C G T C G T A A C G T A C T G A C T G A C G T C G A T A C T G A T C G C G A T C G T A G T A C A G T C C G A T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATGGTTGGTACCT
CGTGGGTGGTCC--
 A C G T C G T A A C G T A C T G A C T G A C G T C G A T A C T G A T C G C G A T C G T A G T A C A G T C C G A T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATGGTTGGTACCT----
ANANNTGATACCCTATN
 C G T A A C G T A C T G A C T G A C G T C G A T A C T G A T C G C G A T C G T A G T A C A G T C C G A T A C G T A C G T A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATGGTTGGTACCT----
AATNTTGATACCCTATN
 C G T A A C G T A C T G A C T G A C G T C G A T A C T G A T C G C G A T C G T A G T A C A G T C C G A T A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATGGTTGGTACCT
TTGATTGN-----
 C G T A A C G T A C T G A C T G A C G T C G A T A C T G A T C G C G A T C G T A G T A C A G T C C G A T
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATGGTTGGTACCT-----
--ACTTGCTACCTACACC
 C G T A A C G T A C T G A C T G A C G T C G A T A C T G A T C G C G A T C G T A G T A C A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATGGTTGGTACCT--
NCCGTTGCTANGNGN
 C G T A A C G T A C T G A C T G A C G T C G A T A C T G A T C G C G A T C G T A G T A C A G T C C G A T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATGGTTGGTACCT----
ANANNTGATACCCNATN
 C G T A A C G T A C T G A C T G A C G T C G A T A C T G A T C G C G A T C G T A G T A C A G T C C G A T A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T