Information for 6-TTAAGGACAG (Motif 13)

A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C T G A A T C G
Reverse Opposite:
T A G C A G C T A C T G A C G T G T A C A G T C A C G T A C G T C G T A C G T A
p-value:1e-9
log p-value:-2.178e+01
Information Content per bp:1.915
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif31.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets35.1 +/- 25.3bp
Average Position of motif in Background58.2 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TTAAGGACAG
-TRAGGTCA-
 A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C T G A A T C G
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TTAAGGACAG-
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C T G A A T C G A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTAAGGACAG
NTCAAGGTCA-
 A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C T G A A T C G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTAAGGACAG--
NNAATTAATGACCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C T G A A T C G A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTAAGGACAG
BTCAAGGTCA-
 A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C T G A A T C G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTAAGGACAG-
-CAAGGHCANV
 A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C T G A A T C G A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TTAAGGACAG
--AAGGTCAC
 A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C T G A A T C G
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTAAGGACAG
NTTTTACGAC--
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C T G A A T C G
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTAAGGACAG
TCAAGGTCAN
 A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C T G A A T C G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTAAGGACAG
TCAAGGTCAT
 A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C T G A A T C G
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T