Information for 10-GCCAAGGTCCTGM (Motif 10)

A C T G G T A C G T A C C G T A C T G A C T A G A C T G A C G T T A G C A T G C A C G T A T C G G T C A
Reverse Opposite:
C A G T T A G C C G T A A T C G A T C G C G T A G T A C G A T C A G C T A C G T A C T G C A T G A G T C
p-value:1e-10
log p-value:-2.434e+01
Information Content per bp:1.763
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 26.7bp
Average Position of motif in Background63.6 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0014.1_Esrra_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGGTCCTGM--
TATTCAAGGTCATGCGA
 A C G T A C G T A C T G G T A C G T A C C G T A C T G A C T A G A C T G A C G T T A G C A T G C A C G T A T C G G T C A A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCAAGGTCCTGM
TTCAAGGTCAT--
 A C T G G T A C G T A C C G T A C T G A C T A G A C T G A C G T T A G C A T G C A C G T A T C G G T C A
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCCAAGGTCCTGM
-TCAAGGTCAT--
 A C T G G T A C G T A C C G T A C T G A C T A G A C T G A C G T T A G C A T G C A C G T A T C G G T C A
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGGTCCTGM
GGGGTCAAAGTCCAAT
 A C G T A C G T A C G T A C T G G T A C G T A C C G T A C T G A C T A G A C T G A C G T T A G C A T G C A C G T A T C G G T C A
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCCAAGGTCCTGM
-TCAAGGTCATA-
 A C T G G T A C G T A C C G T A C T G A C T A G A C T G A C G T T A G C A T G C A C G T A T C G G T C A
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCCAAGGTCCTGM
CANAGNNCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C G T A C C G T A C T G A C T A G A C T G A C G T T A G C A T G C A C G T A T C G G T C A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCAAGGTCCTGM
BTCAAGGTCA---
 A C T G G T A C G T A C C G T A C T G A C T A G A C T G A C G T T A G C A T G C A C G T A T C G G T C A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCAAGGTCCTGM--
GGCAAAAGTCCAATAA
 A C G T A C T G G T A C G T A C C G T A C T G A C T A G A C T G A C G T T A G C A T G C A C G T A T C G G T C A A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCCAAGGTCCTGM
AGAGTCCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C T G G T A C G T A C C G T A C T G A C T A G A C T G A C G T T A G C A T G C A C G T A T C G G T C A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCAAGGTCCTGM
NTCAAGGTCA---
 A C T G G T A C G T A C C G T A C T G A C T A G A C T G A C G T T A G C A T G C A C G T A T C G G T C A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T