Information for 2-CTGGTGGAGTGTT (Motif 4)

A T G C G A C T A C T G C T A G A G C T A C T G A C T G T G C A C A T G A C G T A C T G G A C T A C G T
Reverse Opposite:
G T C A C T G A T G A C G T C A G A T C A C G T G T A C T A G C C T G A A G T C G T A C C G T A A T C G
p-value:1e-13
log p-value:-3.156e+01
Information Content per bp:1.701
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif10.87%
Number of Background Sequences with motif107.9
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets41.6 +/- 27.4bp
Average Position of motif in Background46.0 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTGGTGGAGTGTT
---GTGGAT----
 A T G C G A C T A C T G C T A G A G C T A C T G A C T G T G C A C A T G A C G T A C T G G A C T A C G T
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGGTGGAGTGTT
NNTGTGGATTSS-
 A T G C G A C T A C T G C T A G A G C T A C T G A C T G T G C A C A T G A C G T A C T G G A C T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTGGTGGAGTGTT
---NTGGAATGTN
 A T G C G A C T A C T G C T A G A G C T A C T G A C T G T G C A C A T G A C G T A C T G G A C T A C G T
A C G T A C G T A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G

TEAD3/MA0808.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTGGTGGAGTGTT
----TGGAATGT-
 A T G C G A C T A C T G C T A G A G C T A C T G A C T G T G C A C A T G A C G T A C T G G A C T A C G T
A C G T A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTGGTGGAGTGTT
NNCAGGTGNN-----
 A C G T A C G T A T G C G A C T A C T G C T A G A G C T A C T G A C T G T G C A C A T G A C G T A C T G G A C T A C G T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTGGTGGAGTGTT
---NTGGAATGTG
 A T G C G A C T A C T G C T A G A G C T A C T G A C T G T G C A C A T G A C G T A C T G G A C T A C G T
A C G T A C G T A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTGGTGGAGTGTT
--TGTGGATTNNN
 A T G C G A C T A C T G C T A G A G C T A C T G A C T G T G C A C A T G A C G T A C T G G A C T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTGGTGGAGTGTT-
----TTRAGTGSYK
 A T G C G A C T A C T G C T A G A G C T A C T G A C T G T G C A C A T G A C G T A C T G G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTGGTGGAGTGTT
AACAGGTGNT-----
 A C G T A C G T A T G C G A C T A C T G C T A G A G C T A C T G A C T G T G C A C A T G A C G T A C T G G A C T A C G T
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTGGTGGAGTGTT
---BTBRAGTGSN
 A T G C G A C T A C T G C T A G A G C T A C T G A C T G T G C A C A T G A C G T A C T G G A C T A C G T
A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C