Information for 6-CTGGAACCTGGCA (Motif 7)

A G T C A G C T A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C G T A C T C G A C T A G T C A G A C G T A C G T A G T C G T A C C T G A A C T G
p-value:1e-13
log p-value:-3.221e+01
Information Content per bp:1.805
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.3 +/- 17.3bp
Average Position of motif in Background47.8 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CTGGAACCTGGCA-
------CTTGGCAA
 A G T C A G C T A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CTGGAACCTGGCA--
-----NNTTGGCANN
 A G T C A G C T A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTGGAACCTGGCA--
------NTTGGCANN
 A G T C A G C T A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTGGAACCTGGCA
NGNTCTAGAACCNGV--
 A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C T G A G T C C G T A
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CTGGAACCTGGCA-
-----NGTGGGCAT
 A G T C A G C T A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGGAACCTGGCA
RCCGGAARYN----
 A C G T A G T C A G C T A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C T G A G T C C G T A
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CTGGAACCTGGCA
-------TTGGCA
 A G T C A G C T A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CTGGAACCTGGCA-
-----GGTTGGCAT
 A G T C A G C T A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGGAACCTGGCA-----
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A G T C A G C T A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGGAACCTGGCA
RCCGGAAGTD----
 A C G T A G T C A G C T A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C T G A G T C C G T A
C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T