Information for 11-CCACAACGCG (Motif 21)

A G T C A G T C C G T A A G T C C G T A C G T A A G T C A C T G A T G C A C T G
Reverse Opposite:
A G T C A T C G A G T C C T A G A C G T A C G T A C T G A C G T A C T G A C T G
p-value:1e-8
log p-value:-1.877e+01
Information Content per bp:1.943
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif14.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.1 +/- 25.5bp
Average Position of motif in Background40.9 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCACAACGCG
NWAACCACADNN--
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A C G T A A G T C A C T G A T G C A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCACAACGCG
--ACAAAG--
A G T C A G T C C G T A A G T C C G T A C G T A A G T C A C T G A T G C A C T G
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCACAACGCG
AAACCACAGAN--
A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A C G T A A G T C A C T G A T G C A C T G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCACAACGCG
AAACCACANN---
A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A C G T A A G T C A C T G A T G C A C T G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCACAACGCG
AAACCACAGC---
A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A C G T A A G T C A C T G A T G C A C T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCACAACGCG
VRRACAAWGG-
A C G T A G T C A G T C C G T A A G T C C G T A C G T A A G T C A C T G A T G C A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCACAACGCG
RNAACAATGG-
A C G T A G T C A G T C C G T A A G T C C G T A C G T A A G T C A C T G A T G C A C T G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCACAACGCG
NAAACCACAG----
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A C G T A A G T C A C T G A T G C A C T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCACAACGCG----
--ACAAAGGNBCCT
A G T C A G T C C G T A A G T C C G T A C G T A A G T C A C T G A T G C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

ZNF143/MA0088.2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCACAACGCG---
TACCCACAATGCATTG
A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A C G T A A G T C A C T G A T G C A C T G A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G