Information for 10-TCAACAATTG (Motif 20)

A C G T T A G C C G T A C G T A A G T C C G T A C G T A C G A T C G A T C T A G
Reverse Opposite:
G A T C C G T A C G T A C G A T C G A T A C T G C G A T A C G T A T C G C G T A
p-value:1e-8
log p-value:-1.884e+01
Information Content per bp:1.845
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif87.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets45.1 +/- 26.6bp
Average Position of motif in Background44.3 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0065.1_Sox15_1/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---TCAACAATTG----
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T T A G C C G T A C G T A A G T C C G T A C G T A C G A T C G A T C T A G A C G T A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--TCAACAATTG----
AATGAACAATGGAATT
 A C G T A C G T A C G T T A G C C G T A C G T A A G T C C G T A C G T A C G A T C G A T C T A G A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----TCAACAATTG---
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T T A G C C G T A C G T A A G T C C G T A C G T A C G A T C G A T C T A G A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:4
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TCAACAATTG----
ATAAACAATTAAACA
 A C G T A C G T T A G C C G T A C G T A A G T C C G T A C G T A C G A T C G A T C T A G A C G T A C G T A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TCAACAATTG
-NAACAAT--
 A C G T T A G C C G T A C G T A A G T C C G T A C G T A C G A T C G A T C T A G
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----TCAACAATTG--
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C G T A C G T T A G C C G T A C G T A A G T C C G T A C G T A C G A T C G A T C T A G A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TCAACAATTG
-GAACAATGG
 A C G T T A G C C G T A C G T A A G T C C G T A C G T A C G A T C G A T C T A G
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:TCAACAATTG
--AACAAT--
 A C G T T A G C C G T A C G T A A G T C C G T A C G T A C G A T C G A T C T A G
A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----TCAACAATTG---
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T T A G C C G T A C G T A A G T C C G T A C G T A C G A T C G A T C T A G A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0073.1_Sox7_1/Jaspar

Match Rank:10
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----TCAACAATTG-------
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A C G T A A G T C C G T A C G T A C G A T C G A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A