Motif 19

Information for 14-CCGGCACGCGGCT (Motif 19)

Reverse Opposite:

p-value:	1e-8
log p-value:	-1.948e+01
Information Content per bp:	1.924
Number of Target Sequences with motif	4.0
Percentage of Target Sequences with motif	0.48%
Number of Background Sequences with motif	1.0
Percentage of Background Sequences with motif	0.00%
Average Position of motif in Targets	77.5 +/- 13.5bp
Average Position of motif in Background	31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)	0.0
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

PB0147.1_Max_2/Jaspar

Match Rank:	1
Score:	0.64
Offset:	0
Orientation:	forward strand
Alignment:	CCGGCACGCGGCT- GTGCCACGCGACTG

Hes1/MA1099.1/Jaspar

Match Rank:	2
Score:	0.62
Offset:	2
Orientation:	forward strand
Alignment:	CCGGCACGCGGCT --GGCACGCGTC-

HES5/MA0821.1/Jaspar

Match Rank:	3
Score:	0.59
Offset:	1
Orientation:	forward strand
Alignment:	CCGGCACGCGGCT -CGGCACGTGCCA

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:	4
Score:	0.58
Offset:	4
Orientation:	reverse strand
Alignment:	CCGGCACGCGGCT ----CACGCA---

HES7/MA0822.1/Jaspar

Match Rank:	5
Score:	0.58
Offset:	1
Orientation:	reverse strand
Alignment:	CCGGCACGCGGCT -TGGCACGTGCCA

HEY2/MA0649.1/Jaspar

Match Rank:	6
Score:	0.57
Offset:	2
Orientation:	reverse strand
Alignment:	CCGGCACGCGGCT --GGCACGTGNC-

HEY1/MA0823.1/Jaspar

Match Rank:	7
Score:	0.56
Offset:	2
Orientation:	reverse strand
Alignment:	CCGGCACGCGGCT --GGCACGTGTC-

Tcfl5/MA0632.1/Jaspar

Match Rank:	8
Score:	0.54
Offset:	2
Orientation:	forward strand
Alignment:	CCGGCACGCGGCT --GGCACGTGCC-

POL006.1_BREu/Jaspar

Match Rank:	9
Score:	0.54
Offset:	2
Orientation:	reverse strand
Alignment:	CCGGCACGCGGCT --GGCGCGCT---

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:	10
Score:	0.53
Offset:	1
Orientation:	forward strand
Alignment:	CCGGCACGCGGCT -TBGCACGCAA--