Information for 13-GGAGGGCGCCCCC (Motif 18)

A C T G A C T G C G T A A T C G A C T G A C T G A G T C A C T G A G T C A G T C A T G C A G T C A G T C
Reverse Opposite:
A C T G C T A G A T C G A C T G A C T G G T A C A C T G A G T C A G T C A T G C A C G T A G T C A G T C
p-value:1e-8
log p-value:-1.969e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.8 +/- 22.0bp
Average Position of motif in Background49.9 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GGAGGGCGCCCCC--
TTGGGGGCGCCCCTAG
 A C G T A C T G A C T G C G T A A T C G A C T G A C T G A G T C A C T G A G T C A G T C A T G C A G T C A G T C A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGAGGGCGCCCCC
--AGCGCGCC---
 A C T G A C T G C G T A A T C G A C T G A C T G A G T C A C T G A G T C A G T C A T G C A G T C A G T C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGAGGGCGCCCCC-
ATAAGGGCGCGCGAT
 A C G T A C T G A C T G C G T A A T C G A C T G A C T G A G T C A C T G A G T C A G T C A T G C A G T C A G T C A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

ZBTB7A/MA0750.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGAGGGCGCCCCC
TCGGTGGTCGCN---
 A C G T A C G T A C T G A C T G C G T A A T C G A C T G A C T G A G T C A C T G A G T C A G T C A T G C A G T C A G T C
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGAGGGCGCCCCC-----
-GGTCCCGCCCCCTTCTC
 A C T G A C T G C G T A A T C G A C T G A C T G A G T C A C T G A G T C A G T C A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGAGGGCGCCCCC-
ATAAAGGCGCGCGAT
 A C G T A C T G A C T G C G T A A T C G A C T G A C T G A G T C A C T G A G T C A G T C A T G C A G T C A G T C A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGAGGGCGCCCCC-------
CNNBRGCGCCCCCTGSTGGC
 A C T G A C T G C G T A A T C G A C T G A C T G A G T C A C T G A G T C A G T C A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGAGGGCGCCCCC-----
----TCCGCCCCCGCATT
 A C T G A C T G C G T A A T C G A C T G A C T G A G T C A C T G A G T C A G T C A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGAGGGCGCCCCC
NCANGCGCGCGCGCCA
 A C G T A C G T A C G T A C T G A C T G C G T A A T C G A C T G A C T G A G T C A C T G A G T C A G T C A T G C A G T C A G T C
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGAGGGCGCCCCC
GGGGGAATCCCC-
 A C T G A C T G C G T A A T C G A C T G A C T G A G T C A C T G A G T C A G T C A T G C A G T C A G T C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T