Information for 9-AAATGAATGC (Motif 16)

G T C A C G T A C G T A G C A T T C A G C G T A G T C A A C G T T C A G T A G C
Reverse Opposite:
A T C G A G T C C G T A A C G T C G A T A G T C C G T A A C G T A C G T A C G T
p-value:1e-9
log p-value:-2.108e+01
Information Content per bp:1.795
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.24%
Number of Background Sequences with motif370.9
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets56.3 +/- 27.7bp
Average Position of motif in Background51.6 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----AAATGAATGC-
ACTATGAATGAATGAT
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A G C A T T C A G C G T A G T C A A C G T T C A G T A G C A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AAATGAATGC
HNRAATCAAT--
 A C G T A C G T G T C A C G T A C G T A G C A T T C A G C G T A G T C A A C G T T C A G T A G C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----AAATGAATGC
NNTNTCATGAATGT
 A C G T A C G T A C G T A C G T G T C A C G T A C G T A G C A T T C A G C G T A G T C A A C G T T C A G T A G C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAATGAATGC
AAATCACTGC
 G T C A C G T A C G T A G C A T T C A G C G T A G T C A A C G T T C A G T A G C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AAATGAATGC----
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T G T C A C G T A C G T A G C A T T C A G C G T A G T C A A C G T T C A G T A G C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

ONECUT3/MA0757.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAATGAATGC-
AAAAAATCAATAAT
 A C G T A C G T A C G T G T C A C G T A C G T A G C A T T C A G C G T A G T C A A C G T T C A G T A G C A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAATGAATGC-
AAATCACAGCA
 G T C A C G T A C G T A G C A T T C A G C G T A G T C A A C G T T C A G T A G C A C G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAATGAATGC
VRAACAATGG
 G T C A C G T A C G T A G C A T T C A G C G T A G T C A A C G T T C A G T A G C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

ONECUT1/MA0679.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAATGAATGC-
AAAAAATCGATAAT
 A C G T A C G T A C G T G T C A C G T A C G T A G C A T T C A G C G T A G T C A A C G T T C A G T A G C A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAATGAATGC
CAAATCACTG-
 A C G T G T C A C G T A C G T A G C A T T C A G C G T A G T C A A C G T T C A G T A G C
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T