Information for 9-ARAGCYTWAAYTG (Motif 12)

C G T A C T G A C G T A A C T G A G T C G A T C C G A T C G T A C G T A C G T A A G C T A C G T A C T G
Reverse Opposite:
A G T C C G T A C T G A A C G T A C G T C G A T C G T A C T A G A C T G A G T C A C G T A G C T A C G T
p-value:1e-10
log p-value:-2.516e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.6 +/- 13.8bp
Average Position of motif in Background94.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ARAGCYTWAAYTG-----
-ANNCATTAATTGCTNGN
 C G T A C T G A C G T A A C T G A G T C G A T C C G A T C G T A C G T A C G T A A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ARAGCYTWAAYTG-----
-ANNCATTAATTGCTNGN
 C G T A C T G A C G T A A C T G A G T C G A T C C G A T C G T A C G T A C G T A A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ARAGCYTWAAYTG-----
-ATTCNTTAATTGCTTGT
 C G T A C T G A C G T A A C T G A G T C G A T C C G A T C G T A C G T A C G T A A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

PH0042.1_Hmx2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ARAGCYTWAAYTG-----
-ATTCNTTAATTGCTTGT
 C G T A C T G A C G T A A C T G A G T C G A T C C G A T C G T A C G T A C G T A A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

Hmx3/MA0898.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ARAGCYTWAAYTG-----
-ATTNNTTAATTGCTTGT
 C G T A C T G A C G T A A C T G A G T C G A T C C G A T C G T A C G T A C G T A A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ARAGCYTWAAYTG-----
-ATTNNTTAATTGCTTGT
 C G T A C T G A C G T A A C T G A G T C G A T C C G A T C G T A C G T A C G T A A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:ARAGCYTWAAYTG-
------TTAAGTGC
 C G T A C T G A C G T A A C T G A G T C G A T C C G A T C G T A C G T A C G T A A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

Nkx2-5/MA0063.1/Jaspar

Match Rank:8
Score:0.59
Offset:6
Orientation:forward strand
Alignment:ARAGCYTWAAYTG
------TTAATTG
 C G T A C T G A C G T A A C T G A G T C G A T C C G A T C G T A C G T A C G T A A G C T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A A C G T G C A T C A T G

MSX2/MA0708.1/Jaspar

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:ARAGCYTWAAYTG-
------NTAATTGG
 C G T A C T G A C G T A A C T G A G T C G A T C C G A T C G T A C G T A C G T A A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G

Msx3/MA0709.1/Jaspar

Match Rank:10
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:ARAGCYTWAAYTG-
------NTAATTGN
 C G T A C T G A C G T A A C T G A G T C G A T C C G A T C G T A C G T A C G T A A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G