Information for 4-GCTGATTGTCATT (Motif 5)

A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C T G A G C T G A T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C T A G C T G A A G T C C G T A C G T A A G C T A G T C G T C A A C T G A G T C
p-value:1e-11
log p-value:-2.607e+01
Information Content per bp:1.852
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.8 +/- 28.3bp
Average Position of motif in Background34.0 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCTGATTGTCATT---
-TTGAATGAAATTCGA
 A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C T G A G C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCTGATTGTCATT---
-NCNTTTGTTATTTNN
 A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C T G A G C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTGATTGTCATT
-TTGATTGN----
 A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C T G A G C T G A T C C G T A A C G T A C G T
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTGATTGTCATT
-BTGABTGACAGS
 A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C T G A G C T G A T C C G T A A C G T A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PB0064.1_Sox14_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCTGATTGTCATT---
NNTAATTATAATTNNN
 A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C T G A G C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCTGATTGTCATT--
ACATCTGGWWTYAATTAR
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C T G A G C T G A T C C G T A A C G T A C G T A C G T A C G T
T G C A G T A C C G T A A C G T T G A C C G A T A C T G A C T G C G A T C G A T G C A T A G C T G C T A C T G A A C G T G A C T G C T A C T G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCTGATTGTCATT
TGCTGACTCA----
 A C G T A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C T G A G C T G A T C C G T A A C G T A C G T
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GCTGATTGTCATT
AATTTGCTGAC-------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C T G A G C T G A T C C G T A A C G T A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GCTGATTGTCATT
-----NTGTCAN-
 A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C T G A G C T G A T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCTGATTGTCATT
-NTGATTGACAGN
 A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C T G A G C T G A T C C G T A A C G T A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G