Information for 2-ACACGTGACGGAT (Motif 2)

C T G A A G T C G T C A T G A C C T A G C A G T C A T G G T C A T A G C A T C G A C T G G C T A C A G T
Reverse Opposite:
G T C A C G A T A G T C T A G C A T C G C A G T G A T C G T C A A G T C A C T G A C G T A C T G A G C T
p-value:1e-13
log p-value:-3.222e+01
Information Content per bp:1.682
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.1 +/- 22.3bp
Average Position of motif in Background51.5 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arntl/MA0603.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ACACGTGACGGAT
NCACGTGACN---
 C T G A A G T C G T C A T G A C C T A G C A G T C A T G G T C A T A G C A T C G A C T G G C T A C A G T
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ACACGTGACGGAT
GCACGTGA-----
 C T G A A G T C G T C A T G A C C T A G C A G T C A T G G T C A T A G C A T C G A C T G G C T A C A G T
T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ACACGTGACGGAT
-CACGTGDC----
 C T G A A G T C G T C A T G A C C T A G C A G T C A T G G T C A T A G C A T C G A C T G G C T A C A G T
A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ACACGTGACGGAT
ACACGTGC-----
 C T G A A G T C G T C A T G A C C T A G C A G T C A T G G T C A T A G C A T C G A C T G G C T A C A G T
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ACACGTGACGGAT
-CACGTGNC----
 C T G A A G T C G T C A T G A C C T A G C A G T C A T G G T C A T A G C A T C G A C T G G C T A C A G T
A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACACGTGACGGAT
KCCACGTGAC----
 A C G T C T G A A G T C G T C A T G A C C T A G C A G T C A T G G T C A T A G C A T C G A C T G G C T A C A G T
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACACGTGACGGAT
ATCACGTGAC----
 A C G T C T G A A G T C G T C A T G A C C T A G C A G T C A T G G T C A T A G C A T C G A C T G G C T A C A G T
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACACGTGACGGAT
-CACGTG------
 C T G A A G T C G T C A T G A C C T A G C A G T C A T G G T C A T A G C A T C G A C T G G C T A C A G T
A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ACACGTGACGGAT
GGCACGTGNC----
 A C G T C T G A A G T C G T C A T G A C C T A G C A G T C A T G G T C A T A G C A T C G A C T G G C T A C A G T
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ACACGTGACGGAT
ATCACGTGAC----
 A C G T C T G A A G T C G T C A T G A C C T A G C A G T C A T G G T C A T A G C A T C G A C T G G C T A C A G T
T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C A C G T A C G T A C G T A C G T