Information for 2-CTCGGCATGG (Motif 15)

A G T C C G A T A G T C C T A G C T A G A T G C T G C A A C G T T C A G A C T G
Reverse Opposite:
T G A C A G T C G T C A A C G T A T C G A G T C A G T C A C T G C G T A A C T G
p-value:1e-10
log p-value:-2.319e+01
Information Content per bp:1.839
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.41%
Number of Background Sequences with motif191.1
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets57.1 +/- 25.1bp
Average Position of motif in Background45.4 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTCGGCATGG
DCTCAGCAGG-
 A C G T A G T C C G A T A G T C C T A G C T A G A T G C T G C A A C G T T C A G A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTCGGCATGG
WDNCTGGGCA---
 A C G T A C G T A C G T A G T C C G A T A G T C C T A G C T A G A T G C T G C A A C G T T C A G A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTCGGCATGG--
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C C G A T A G T C C T A G C T A G A T G C T G C A A C G T T C A G A C T G A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CTCGGCATGG
GGGGCCGAGGCCTG-
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A G T C C T A G C T A G A T G C T G C A A C G T T C A G A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCGGCATGG
GCTCGGSCTC-
 A C G T A G T C C G A T A G T C C T A G C T A G A T G C T G C A A C G T T C A G A C T G
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTCGGCATGG--
GAGCACAGCAGGACA
 A C G T A C G T A C G T A G T C C G A T A G T C C T A G C T A G A T G C T G C A A C G T T C A G A C T G A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCGGCATGG--
CACAGCAGGGGG
 A G T C C G A T A G T C C T A G C T A G A T G C T G C A A C G T T C A G A C T G A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTCGGCATGG--
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C C G A T A G T C C T A G C T A G A T G C T G C A A C G T T C A G A C T G A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCGGCATGG
NNTTGGCANN-
 A C G T A G T C C G A T A G T C C T A G C T A G A T G C T G C A A C G T T C A G A C T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCGGCATGG
NGTGGGCAT--
 A C G T A G T C C G A T A G T C C T A G C T A G A T G C T G C A A C G T T C A G A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T